RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 NR1I3Q14994 352 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 RRAGAQ7L523 313 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 NBPF3Q9H094 633 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 BCL9O00512 1426 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 FANCGO15287 622 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 TACC1O75410 805 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 ATP1A1P05023 1023 aaKnown RBP11.91□□□□□ -0.5
PDCD6-209ENST00000512466 GNAT2P19087 354 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 KIF5BP33176 963 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 KLK7P49862 253 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 LRRC41Q15345 812 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 ENAHQ8N8S7 591 aaPredicted RBP11.91□□□□□ -0.5
PDCD6-209ENST00000512466 GOLGA5Q8TBA6 731 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 CRNKL1Q9BZJ0 848 aaKnown RBP11.91□□□□□ -0.5
PDCD6-209ENST00000512466 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
PDCD6-209ENST00000512466 ABHD10Q9NUJ1 306 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 DUSP10Q9Y6W6 482 aa11.91□□□□□ -0.5
PDCD6-209ENST00000512466 SMIM23A6NLE4 172 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 MPHOSPH10O00566 681 aaKnown RBP11.9□□□□□ -0.5
PDCD6-209ENST00000512466 NTRK3Q16288 839 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 NELFCDQ8IXH7 590 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 CCDC113Q9H0I3 377 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 HSD3B7Q9H2F3 369 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 DISP2A7MBM2 1401 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 EBAG9O00559 213 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 SUSD4Q5VX71 490 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 FAM212AQ96EL1 285 aa11.9□□□□□ -0.5
PDCD6-209ENST00000512466 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
PDCD6-209ENST00000512466 VEGFAP15692 232 aaPredicted RBP11.9□□□□□ -0.51
PDCD6-209ENST00000512466 IQCEQ6IPM2 695 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 BCAS4Q8TDM0 211 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 FERMT2Q96AC1 680 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 GSDMAQ96QA5 445 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 MMS19Q96T76 1030 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.51
PDCD6-209ENST00000512466 LRWD1Q9UFC0 647 aa11.9□□□□□ -0.51
PDCD6-209ENST00000512466 RTL9Q8NET4 1388 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 GOLGA6L10A6NI86 522 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 WNT7AO00755 349 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ACTN4O43707 911 aaKnown RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 TNNI2P48788 182 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 EVX2Q03828 476 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 PROCA1Q8NCQ7 364 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 CALML4Q96GE6 196 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 TRIM31Q9BZY9 425 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ESYT3A0FGR9 886 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 PICALMQ13492 652 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 PANX2Q96RD6 677 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 NAA15Q9BXJ9 866 aaKnown RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 IFIH1Q9BYX4 1025 aaKnown RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 EHD2Q9NZN4 543 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 BIN2Q9UBW5 565 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 NDUFAB1O14561 156 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 HSF2BPO75031 334 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 BMP15O95972 392 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 SCG2P13521 617 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 MAGEA1P43355 309 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 ERVK-24P63145 666 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 CKAP4Q07065 602 aaKnown RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 TCP11X2Q5H9J9 407 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 MAPKAPK5Q8IW41 473 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 COL22A1Q8NFW1 1626 aaPredicted RBP11.89□□□□□ -0.51
PDCD6-209ENST00000512466 TAF4BQ92750 862 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 EXOC4Q96A65 974 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
PDCD6-209ENST00000512466 A0A1B0GTH6 734 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 ZRANB2O95218 330 aaKnown RBP eCLIP11.88□□□□□ -0.51
PDCD6-209ENST00000512466 MOCS3O95396 460 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 WHAMMP3Q1A5X7 153 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 TRAF5O00463 557 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 NCK2O43639 380 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 GGCXP38435 758 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 GNGT1P63211 74 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 ITPK1Q13572 414 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 PARP4Q9UKK3 1724 aaKnown RBP11.88□□□□□ -0.51
PDCD6-209ENST00000512466 RNF225M0QZC1 329 aaPredicted RBP11.88□□□□□ -0.51
PDCD6-209ENST00000512466 HGSO14964 777 aaPredicted RBP11.88□□□□□ -0.51
PDCD6-209ENST00000512466 RAPGEF1Q13905 1077 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
PDCD6-209ENST00000512466 RASSF7Q02833 373 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms