RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 hCG_1984214I3L0E3 225 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 KLRC4O43908 158 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 BBOX1O75936 387 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 ZRANB2O95218 330 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 PPP1R2P41236 205 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 BTDP43251 543 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 FXR1P51114 621 aaKnown RBP eCLIP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 CLCN6P51797 869 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 STIM1Q13586 685 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 MTF1Q14872 753 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 INF2Q27J81 1249 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 PRR5LQ6MZQ0 368 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 RSRC2Q7L4I2 434 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 ZNF713Q8N859 430 aaPredicted RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 NOC3LQ8WTT2 800 aaKnown RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
CPNE4-210ENST00000512332 EYA3Q99504 573 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 DESI2Q9BSY9 194 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 TMEM60Q9H2L4 133 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 THAP9Q9H5L6 903 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 C6orf50Q9HD87 102 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 MYO1AQ9UBC5 1043 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 PRDM4Q9UKN5 801 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 STX8Q9UNK0 236 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 GAKO14976 1311 aa10.41□□□□□ -0.74
CPNE4-210ENST00000512332 KIF5CO60282 957 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 PARP1P09874 1014 aaKnown RBP10.4□□□□□ -0.74
CPNE4-210ENST00000512332 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 GPSM2P81274 684 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 CYP26C1Q6V0L0 522 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 IRF2BP1Q8IU81 584 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 SLC44A5Q8NCS7 719 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 RASGRP4Q8TDF6 673 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 CPLX3Q8WVH0 158 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 RPGRQ92834 1020 aaKnown RBP10.4□□□□□ -0.74
CPNE4-210ENST00000512332 ABHD10Q9NUJ1 306 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 GGA1Q9UJY5 639 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 SNED1Q8TER0 1413 aa10.4□□□□□ -0.74
CPNE4-210ENST00000512332 PSMA7O14818 248 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 CDC25AP30304 524 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 HOXA10P31260 410 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 RHBDL3P58872 404 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 PPP2R3AQ06190 1150 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 NONOQ15233 471 aaKnown RBP eCLIP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 COBLL1Q53SF7 1204 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 TEX11Q8IYF3 940 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 RRP36Q96EU6 259 aaKnown RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 RBM17Q96I25 401 aaKnown RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 USP21Q9UK80 565 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 GDAQ9Y2T3 454 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 FHOD1Q9Y613 1164 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 DDX60LQ5H9U9 1706 aaKnown RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 LGALS16A8MUM7 142 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 UFL1O94874 794 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 OR52Z1P0C646 297 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 HOXA7P31268 230 aaPredicted RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 CCT6AP40227 531 aaKnown RBP10.39□□□□□ -0.75
CPNE4-210ENST00000512332 NAPAP54920 295 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 SLC4A8Q2Y0W8 1093 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 JAKMIP3Q5VZ66 844 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 TMCO3Q6UWJ1 677 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 ZNF507Q8TCN5 953 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 C7orf25Q9BPX7 421 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 VPS16Q9H269 839 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 RIOX1Q9H6W3 641 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 FLT1P17948 1338 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
CPNE4-210ENST00000512332 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 SMCO2A6NFE2 343 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 ONECUT3O60422 494 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 KIF20AO95235 890 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 AMPD3Q01432 767 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 TMC4Q7Z404 712 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 NEK8Q86SG6 692 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 CREBRFQ8IUR6 639 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 MB21D1Q8N884 522 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 TAB2Q9NYJ8 693 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 SEC63Q9UGP8 760 aaKnown RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 SAP30BPQ9UHR5 308 aaKnown RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 CDC23Q9UJX2 597 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 SUGT1Q9Y2Z0 365 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 KRT9P35527 623 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 ERVK-24P63145 666 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 ST5P78524 1137 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 UBXN1Q04323 297 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 TTI2Q6NXR4 508 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 CABP7Q86V35 215 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 RETREG2Q8NC44 543 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 OR8K1Q8NGG5 319 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 RASSF8Q8NHQ8 419 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 GOLGA1Q92805 767 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 CRAMP1Q96RY5 1269 aa10.38□□□□□ -0.75
CPNE4-210ENST00000512332 NUP88Q99567 741 aaPredicted RBP10.38□□□□□ -0.75
CPNE4-210ENST00000512332 DNAJC7Q99615 494 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms