RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 SH2D4AQ9H788 454 aa14.56□□□□□ -0.08
COPS4-210ENST00000511708 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
COPS4-210ENST00000511708 LMCD1Q9NZU5 365 aa14.56□□□□□ -0.08
COPS4-210ENST00000511708 FPGT-TNNI3KV9GXZ4 949 aa14.56□□□□□ -0.08
COPS4-210ENST00000511708 ASTN1O14525 1302 aa14.56□□□□□ -0.08
COPS4-210ENST00000511708 TANC1Q9C0D5 1861 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
COPS4-210ENST00000511708 GNAI3P08754 354 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 BEX3Q00994 111 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 ICA1Q05084 483 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 G3BP1Q13283 466 aaKnown RBP eCLIP14.55□□□□□ -0.08
COPS4-210ENST00000511708 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 LEXMQ3ZCV2 418 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 TMED8Q6PL24 325 aaPredicted RBP14.55□□□□□ -0.08
COPS4-210ENST00000511708 SPRED2Q7Z698 418 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 UBE2ZQ9H832 354 aaPredicted RBP14.55□□□□□ -0.08
COPS4-210ENST00000511708 RIPK3Q9Y572 518 aa14.55□□□□□ -0.08
COPS4-210ENST00000511708 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
COPS4-210ENST00000511708 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
COPS4-210ENST00000511708 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.54□□□□□ -0.08
COPS4-210ENST00000511708 DDX11Q96FC9 970 aa14.54□□□□□ -0.08
COPS4-210ENST00000511708 TEX13BQ9BXU2 312 aa14.54□□□□□ -0.08
COPS4-210ENST00000511708 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
COPS4-210ENST00000511708 BAZ2AQ9UIF9 1905 aaKnown RBP14.54□□□□□ -0.08
COPS4-210ENST00000511708 SIP14410 1827 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 PNMA6EA0A0J9YXQ4 647 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 AKR1B1P15121 316 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 ARMCX2Q7L311 632 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 HERC6Q8IVU3 1022 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 SWAP70Q9UH65 585 aa14.53□□□□□ -0.08
COPS4-210ENST00000511708 NOB1Q9ULX3 412 aaKnown RBP14.53□□□□□ -0.08
COPS4-210ENST00000511708 GNEQ9Y223 722 aaKnown RBP14.53□□□□□ -0.08
COPS4-210ENST00000511708 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.52□□□□□ -0.09
COPS4-210ENST00000511708 DCXO43602 365 aa14.52□□□□□ -0.09
COPS4-210ENST00000511708 IL9P15248 144 aa14.52□□□□□ -0.09
COPS4-210ENST00000511708 SNRNP48Q6IEG0 339 aaKnown RBP14.52□□□□□ -0.09
COPS4-210ENST00000511708 PHOX2BQ99453 314 aa14.52□□□□□ -0.09
COPS4-210ENST00000511708 MCM9Q9NXL9 1143 aa14.52□□□□□ -0.09
COPS4-210ENST00000511708 GREB1LQ9C091 1923 aaPredicted RBP14.52□□□□□ -0.09
COPS4-210ENST00000511708 C5orf42Q9H799 3197 aa14.52□□□□□ -0.09
COPS4-210ENST00000511708 TECTAO75443 2155 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 TRIP12Q14669 1992 aaPredicted RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 CACNA1HO95180 2353 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 E9PSI1 815 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 ATP2A1O14983 1001 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 CYP2D6P10635 497 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 ACTN1P12814 892 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 EEF2P13639 858 aaKnown RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 SSTR3P32745 418 aaPredicted RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 FSCN1Q16658 493 aaKnown RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 DEFB128Q7Z7B8 93 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 DYNLL2Q96FJ2 89 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 DBNLQ9UJU6 430 aaKnown RBP14.51□□□□□ -0.09
COPS4-210ENST00000511708 SCN10AQ9Y5Y9 1956 aa14.51□□□□□ -0.09
COPS4-210ENST00000511708 GRXCR2A6NFK2 248 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 KIF28PB7ZC32 967 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 ST18O60284 1047 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 PSMC6P62333 389 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 TNFAIP2Q03169 654 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 FAM83BQ5T0W9 1011 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 TLK2Q86UE8 772 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 CCDC144CPQ8IYA2 1237 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 GDPD5Q8WTR4 605 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 ANKS1AQ92625 1134 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 CCDC17Q96LX7 622 aa14.5□□□□□ -0.09
COPS4-210ENST00000511708 DCP1AQ9NPI6 582 aaPredicted RBP14.5□□□□□ -0.09
COPS4-210ENST00000511708 MAGEB6P1A0A0J9YX57 407 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 CYP2C9P11712 490 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 KCNA5P22460 613 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 RFC2P35250 354 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 PTCRAQ6ISU1 281 aaPredicted RBP14.49□□□□□ -0.09
COPS4-210ENST00000511708 HFE2Q6ZVN8 426 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 CRNKL1Q9BZJ0 848 aaKnown RBP14.49□□□□□ -0.09
COPS4-210ENST00000511708 GOPCQ9HD26 462 aa14.49□□□□□ -0.09
COPS4-210ENST00000511708 TLR7Q9NYK1 1049 aaKnown RBP14.49□□□□□ -0.09
COPS4-210ENST00000511708 ZFHX2Q9C0A1 2572 aaPredicted RBP14.49□□□□□ -0.09
COPS4-210ENST00000511708 ZNF536O15090 1300 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 LCHNA4D1U4 455 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 SUPT20HL2P0C7V6 817 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 PTGS1P23219 599 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 SLFN5Q08AF3 891 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 SDR42E1Q8WUS8 393 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 KANSL2Q9H9L4 492 aa14.48□□□□□ -0.09
COPS4-210ENST00000511708 TRMT13Q9NUP7 481 aaKnown RBP14.48□□□□□ -0.09
COPS4-210ENST00000511708 TNKSO95271 1327 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 PTPRZ1P23471 2315 aaPredicted RBP14.47□□□□□ -0.09
COPS4-210ENST00000511708 ZEB2O60315 1214 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 GNAI2P04899 355 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 SMPD1P17405 629 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 FOXK2Q01167 660 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 POLA2Q14181 598 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 PUS10Q3MIT2 529 aaKnown RBP14.47□□□□□ -0.09
COPS4-210ENST00000511708 ANKRD35Q8N283 1001 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 PIAS4Q8N2W9 510 aaPredicted RBP14.47□□□□□ -0.09
COPS4-210ENST00000511708 FAM133AQ8N9E0 248 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 NEK9Q8TD19 979 aa14.47□□□□□ -0.09
COPS4-210ENST00000511708 SUGCTQ9HAC7 445 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms