RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ACER1Q8TDN7 264 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 CUL5Q93034 780 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 FEZ1Q99689 392 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 PICK1Q9NRD5 415 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 DOCK1Q14185 1865 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 KINO60870 393 aaKnown RBP17.37■□□□□ 0.37
SCLT1-209ENST00000511426 LIG1P18858 919 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 SLC16A2P36021 539 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 NONOQ15233 471 aaKnown RBP eCLIP17.37■□□□□ 0.37
SCLT1-209ENST00000511426 QRICH1Q2TAL8 776 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 FSIP1Q8NA03 581 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 KLRG1Q96E93 195 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 CLSTN2Q9H4D0 955 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 PCDHB6Q9Y5E3 794 aa17.37■□□□□ 0.37
SCLT1-209ENST00000511426 FDX1P10109 184 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 ATP2C1P98194 919 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 IKQ13123 557 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 RBM43Q6ZSC3 357 aaKnown RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 ENGASEQ8NFI3 743 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 TIGD1Q96MW7 591 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 NAP1L4Q99733 375 aaKnown RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 GOLGB1Q14789 3259 aaKnown RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 SCN4AP35499 1836 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 EPHX2P34913 555 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 EARS2Q5JPH6 523 aaKnown RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 FBXO11Q86XK2 927 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 WRNIP1Q96S55 665 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 FBXO2Q9UK22 296 aaPredicted RBP17.36■□□□□ 0.37
SCLT1-209ENST00000511426 PRR12Q9ULL5 1215 aa17.36■□□□□ 0.37
SCLT1-209ENST00000511426 SYCE3A1L190 88 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 C19orf81C9J6K1 198 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 PPP1R12BO60237 982 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 NR1I2O75469 434 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 MRE11P49959 708 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 AP3B2Q13367 1082 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 SNW1Q13573 536 aaKnown RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 RESP18Q5W5W9 173 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 ELOA2Q8IYF1 753 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 FMR1NBQ8N0W7 255 aaPredicted RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 C12orf42Q96LP6 360 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 TNMDQ9H2S6 317 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
SCLT1-209ENST00000511426 HPSEQ9Y251 543 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 SSC5DA1L4H1 1573 aa17.35■□□□□ 0.37
SCLT1-209ENST00000511426 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
SCLT1-209ENST00000511426 NF2P35240 595 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 PRPHP41219 470 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 FAM83BQ5T0W9 1011 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 NEK8Q86SG6 692 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.34■□□□□ 0.37
SCLT1-209ENST00000511426 PSTPIP2Q9H939 334 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 FAM13BQ9NYF5 915 aa17.34■□□□□ 0.37
SCLT1-209ENST00000511426 WDR90Q96KV7 1748 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 PTPRAP18433 802 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 INPP5BP32019 993 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 BACE1P56817 501 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 SPICE1Q8N0Z3 855 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 ZNF280CQ8ND82 737 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 COA7Q96BR5 231 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 CCDC34Q96HJ3 373 aa17.33■□□□□ 0.37
SCLT1-209ENST00000511426 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.37
SCLT1-209ENST00000511426 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.36
SCLT1-209ENST00000511426 FAM205CA6NFA0 338 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 FOSP01100 380 aaPredicted RBP17.32■□□□□ 0.36
SCLT1-209ENST00000511426 PRPF38AQ8NAV1 312 aaKnown RBP17.32■□□□□ 0.36
SCLT1-209ENST00000511426 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
SCLT1-209ENST00000511426 GOLPH3LQ9H4A5 285 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 PIK3CDO00329 1044 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 PFKFB1P16118 471 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
SCLT1-209ENST00000511426 SYKP43405 635 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 PTGDRQ13258 359 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 KIAA1755Q5JYT7 1200 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 SHC4Q6S5L8 630 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 KRT26Q7Z3Y9 468 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 SAMD3Q8N6K7 520 aa17.32■□□□□ 0.36
SCLT1-209ENST00000511426 SCAF8Q9UPN6 1271 aaKnown RBP17.32■□□□□ 0.36
SCLT1-209ENST00000511426 CAVIN2O95810 425 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 CCDC192P0DO97 292 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 ATP2B1P20020 1258 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 NDUFA8P51970 172 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 INF2Q27J81 1249 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 PPP4R3AQ6IN85 833 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 MOXD1Q6UVY6 613 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 RASGRP4Q8TDF6 673 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 SLF1Q9BQI6 1058 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
SCLT1-209ENST00000511426 TAF1DQ9H5J8 278 aaPredicted RBP17.31■□□□□ 0.36
SCLT1-209ENST00000511426 HOOK1Q9UJC3 728 aaKnown RBP17.31■□□□□ 0.36
SCLT1-209ENST00000511426 A0A1B0GVL5 298 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 UNCXA6NJT0 531 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 MCM7P33993 719 aa17.3■□□□□ 0.36
SCLT1-209ENST00000511426 LONP1P36776 959 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms