RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 PRR23CQ6ZRP0 262 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 DEFB132Q7Z7B7 95 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 GIMAP7Q8NHV1 300 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 TM9SF2Q99805 663 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 CNNM2Q9H8M5 875 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 KLHL3Q9UH77 587 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 PLCH1Q4KWH8 1693 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 ALS2Q96Q42 1657 aa10.47□□□□□ -0.73
LINC01088-207ENST00000511241 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
LINC01088-207ENST00000511241 CHURC1-FNTBB4DL54 471 aa10.46□□□□□ -0.73
LINC01088-207ENST00000511241 STK10O94804 968 aaKnown RBP10.46□□□□□ -0.73
LINC01088-207ENST00000511241 OVOS1Q6IE37 1185 aa10.46□□□□□ -0.73
LINC01088-207ENST00000511241 LSRQ86X29 649 aaPredicted RBP10.46□□□□□ -0.73
LINC01088-207ENST00000511241 TAB3Q8N5C8 712 aaPredicted RBP10.46□□□□□ -0.73
LINC01088-207ENST00000511241 UBXN4Q92575 508 aa10.46□□□□□ -0.73
LINC01088-207ENST00000511241 ATG4CQ96DT6 458 aa10.46□□□□□ -0.73
LINC01088-207ENST00000511241 ACEP12821 1306 aa10.46□□□□□ -0.73
LINC01088-207ENST00000511241 EIF3AQ14152 1382 aaKnown RBP10.46□□□□□ -0.74
LINC01088-207ENST00000511241 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 UPK3BL1B0FP48 263 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 UPK3BL2E5RIL1 263 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 DNAJA2O60884 412 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 H2AFB1P0C5Y9 115 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 H2AFB2P0C5Z0 115 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 NBPF8Q3BBV2 869 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 PRAMEF13Q5VWM6 474 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 ARMCX6Q7L4S7 300 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 NLRC3Q7RTR2 1065 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 ANAPC16Q96DE5 110 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 PSMG3-AS1Q96PY0 264 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 ANTXR1Q9H6X2 564 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 C7orf69Q9H7B7 122 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 C1GALT1Q9NS00 363 aa10.45□□□□□ -0.74
LINC01088-207ENST00000511241 PPP1R1BQ9UD71 204 aaPredicted RBP10.45□□□□□ -0.74
LINC01088-207ENST00000511241 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 MSTNO14793 375 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 NME1P15531 152 aaKnown RBP10.44□□□□□ -0.74
LINC01088-207ENST00000511241 GTF2F1P35269 517 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINC01088-207ENST00000511241 TNNI3KQ59H18 835 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 ARSHQ5FYA8 562 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 C19orf47Q8N9M1 422 aaKnown RBP10.44□□□□□ -0.74
LINC01088-207ENST00000511241 ZNF408Q9H9D4 720 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 LGR6Q9HBX8 967 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 PRDM11Q9NQV5 511 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 PRKAG3Q9UGI9 489 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 MRVI1Q9Y6F6 885 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 NRAPQ86VF7 1730 aa10.44□□□□□ -0.74
LINC01088-207ENST00000511241 CENPJQ9HC77 1338 aaPredicted RBP10.43□□□□□ -0.74
LINC01088-207ENST00000511241 TNFRSF10CO14798 259 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 DYNC1LI2O43237 492 aaPredicted RBP10.43□□□□□ -0.74
LINC01088-207ENST00000511241 IGHA1P01876 353 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 RAG1P15918 1043 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 ETFBP38117 255 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 CCNFP41002 786 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 RBL2Q08999 1139 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 KRT27Q7Z3Y8 459 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 CYB5D2Q8WUJ1 264 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 CCDC74BQ96LY2 380 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 USP35Q9P2H5 1018 aa10.43□□□□□ -0.74
LINC01088-207ENST00000511241 POLR3AO14802 1390 aaPredicted RBP10.42□□□□□ -0.74
LINC01088-207ENST00000511241 NWD2Q9ULI1 1742 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 CRYBG1Q9Y4K1 1723 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 HMX2A2RU54 273 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 PROCP04070 461 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 GUCY2CP25092 1073 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 CASP7P55210 303 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 DOC2BQ14184 412 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 PHACTR4Q8IZ21 702 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 DHX38Q92620 1227 aaKnown RBP10.42□□□□□ -0.74
LINC01088-207ENST00000511241 SPOCK3Q9BQ16 436 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 PRDM10Q9NQV6 1147 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 SLC12A7Q9Y666 1083 aa10.42□□□□□ -0.74
LINC01088-207ENST00000511241 RGS13O14921 159 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 GSC2O15499 205 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 RNF43Q68DV7 783 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 SLC51AQ86UW1 340 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 DPH2Q9BQC3 489 aaPredicted RBP10.41□□□□□ -0.74
LINC01088-207ENST00000511241 COL14A1Q05707 1796 aaKnown RBP10.41□□□□□ -0.74
LINC01088-207ENST00000511241 KIAA1210Q9ULL0 1709 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 BLMP54132 1417 aaPredicted RBP10.41□□□□□ -0.74
LINC01088-207ENST00000511241 PPIP5K1Q6PFW1 1433 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
LINC01088-207ENST00000511241 CDK5R2Q13319 367 aa10.4□□□□□ -0.74
LINC01088-207ENST00000511241 ZAR1Q86SH2 424 aa10.4□□□□□ -0.74
LINC01088-207ENST00000511241 CKAP2LQ8IYA6 745 aa10.4□□□□□ -0.74
LINC01088-207ENST00000511241 SMAD7O15105 426 aaKnown RBP10.39□□□□□ -0.75
LINC01088-207ENST00000511241 NBPF6Q5VWK0 638 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 OGFOD3Q6PK18 319 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 NBPF4Q96M43 638 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 TBC1D32Q96NH3 1257 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 CEP131Q9UPN4 1083 aa10.39□□□□□ -0.75
LINC01088-207ENST00000511241 R3HCC1Q9Y3T6 440 aaKnown RBP10.39□□□□□ -0.75
LINC01088-207ENST00000511241 PHRF1Q9P1Y6 1649 aaKnown RBP10.39□□□□□ -0.75
LINC01088-207ENST00000511241 ITSN1Q15811 1721 aa10.38□□□□□ -0.75
LINC01088-207ENST00000511241 USP19O94966 1318 aa10.38□□□□□ -0.75
LINC01088-207ENST00000511241 SPATA31A1Q5TZJ5 1347 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms