RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 GDF11O95390 407 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 MAP3K10Q02779 954 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 PNOCQ13519 176 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 ABCB5Q2M3G0 1257 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 PPP4R3BQ5MIZ7 849 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 ZNF654Q8IZM8 581 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 CLIC6Q96NY7 704 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 FEZ1Q99689 392 aa18.26■□□□□ 0.51
SQSTM1-213ENST00000510187 MYH8P13535 1937 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 CATIPQ7Z7H3 387 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 ANKS1AQ92625 1134 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 HOOK2Q96ED9 719 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 DACH1Q9UI36 760 aa18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 FBXO2Q9UK22 296 aaPredicted RBP18.25■□□□□ 0.51
SQSTM1-213ENST00000510187 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 BTBD18B2RXH4 712 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 TOB1P50616 345 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 MDM2Q00987 491 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 RRP1BQ14684 758 aaKnown RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 SHROOM1Q2M3G4 852 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 LONRF3Q496Y0 759 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 NT5DC1Q5TFE4 455 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 E4F1Q66K89 784 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 KANK3Q6NY19 840 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 KRT26Q7Z3Y9 468 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 TRIML1Q8N9V2 468 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 FANCBQ8NB91 859 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 NUP133Q8WUM0 1156 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 RNF26Q9BY78 433 aaPredicted RBP18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 CABP5Q9NP86 173 aa18.24■□□□□ 0.51
SQSTM1-213ENST00000510187 ADM5C9JUS6 153 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 GH2P01242 217 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 GUCY1A2P33402 732 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 UBASH3AP57075 661 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 DCAF15Q66K64 600 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 TMEM179Q6ZVK1 233 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 CLEC10AQ8IUN9 316 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 PPP1R13BQ96KQ4 1090 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 TTLL1O95922 423 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 XBP1P17861 261 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 SUPT20HL1Q3ZLR7 823 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 FCHSD1Q86WN1 690 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 VSTM4Q8IW00 320 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 MLKLQ8NB16 471 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 TMEM47Q9BQJ4 181 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 PCDHA5Q9Y5H7 936 aa18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 SRPRBQ9Y5M8 271 aaKnown RBP18.23■□□□□ 0.51
SQSTM1-213ENST00000510187 DDAH1O94760 285 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 SERPINC1P01008 464 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 NOVP48745 357 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 JAG1P78504 1218 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 SEPT2Q15019 361 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 POSTNQ15063 836 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 CT47A1Q5JQC4 288 aaPredicted RBP18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 PNMA1Q8ND90 353 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 KANSL2Q9H9L4 492 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 TRMT1Q9NXH9 659 aaKnown RBP18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
SQSTM1-213ENST00000510187 PHF20L1A8MW92 1017 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 BMP15O95972 392 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 CALM1P0DP23 149 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 CALM2P0DP24 149 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 CALM3P0DP25 149 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 TOP1P11387 765 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 ATP1A3P13637 1013 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 CAP2P40123 477 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 ATP2B2Q01814 1243 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 TROAPQ12815 778 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 DLK2Q6UY11 383 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 ZNF526Q8TF50 670 aaPredicted RBP18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 CCDC34Q96HJ3 373 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 TMX1Q9H3N1 280 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 RBM28Q9NW13 759 aaKnown RBP18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 KCNJ14Q9UNX9 436 aa18.21■□□□□ 0.51
SQSTM1-213ENST00000510187 UBE2Q2LH0YL09 131 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 SARSP49591 514 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 ICA1Q05084 483 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 ZNF341Q9BYN7 854 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 L2HGDHQ9H9P8 463 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 MAN1B1Q9UKM7 699 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 ZBTB21Q9ULJ3 1066 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 POLR2AP24928 1970 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 MYH6P13533 1939 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 SLU7O95391 586 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 AKAP17AQ02040 695 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 ISM2Q6H9L7 571 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 LRRC47Q8N1G4 583 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 ENOX1Q8TC92 643 aaKnown RBP18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 SMARCE1Q969G3 411 aa18.2■□□□□ 0.5
SQSTM1-213ENST00000510187 GREB1LQ9C091 1923 aaPredicted RBP18.19■□□□□ 0.5
SQSTM1-213ENST00000510187 POTEIP0CG38 1075 aa18.19■□□□□ 0.5
SQSTM1-213ENST00000510187 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
SQSTM1-213ENST00000510187 EEF2P13639 858 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-213ENST00000510187 MORC3Q14149 939 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms