RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
SNF8-207ENST00000509995 TPRP12270 2363 aaKnown RBP13.23□□□□□ -0.29
SNF8-207ENST00000509995 SHMT1P34896 483 aa13.23□□□□□ -0.29
SNF8-207ENST00000509995 BEX3Q00994 111 aa13.23□□□□□ -0.29
SNF8-207ENST00000509995 SUGP1Q8IWZ8 645 aaKnown RBP13.23□□□□□ -0.29
SNF8-207ENST00000509995 MTUS1Q9ULD2 1270 aa13.23□□□□□ -0.29
SNF8-207ENST00000509995 CFAP47Q6ZTR5 3102 aa13.23□□□□□ -0.29
SNF8-207ENST00000509995 COL4A6Q14031 1691 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 BAHCC1Q9P281 2608 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 ARID4AP29374 1257 aaPredicted RBP13.22□□□□□ -0.29
SNF8-207ENST00000509995 COPB2P35606 906 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 MCAMP43121 646 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 ID4P47928 161 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 EDAQ92838 391 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 ATOH1Q92858 354 aaPredicted RBP13.22□□□□□ -0.29
SNF8-207ENST00000509995 PBXIP1Q96AQ6 731 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 IRF2BPLQ9H1B7 796 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 ABHD16BQ9H3Z7 469 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.22□□□□□ -0.29
SNF8-207ENST00000509995 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
SNF8-207ENST00000509995 MYH8P13535 1937 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 ASTN1O14525 1302 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 TMEM221A6NGB7 291 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 M0R296 226 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 RFC2P35250 354 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 STAT3P40763 770 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 ASCL5Q7RTU5 278 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 ZNF467Q7Z7K2 595 aaPredicted RBP13.21□□□□□ -0.29
SNF8-207ENST00000509995 SPICE1Q8N0Z3 855 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 ALDH8A1Q9H2A2 487 aaPredicted RBP13.21□□□□□ -0.29
SNF8-207ENST00000509995 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
SNF8-207ENST00000509995 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
SNF8-207ENST00000509995 DNAJC25-GNG10A0A024R161 153 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 ERVK-21P61565 698 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
SNF8-207ENST00000509995 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
SNF8-207ENST00000509995 COPRSQ9NQ92 184 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 NCOR2Q9Y618 2525 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
SNF8-207ENST00000509995 SOWAHBA6NEL2 793 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 WDR46O15213 610 aaKnown RBP13.19□□□□□ -0.3
SNF8-207ENST00000509995 CYP2C9P11712 490 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 KCNJ6P48051 423 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 PSMC6P62333 389 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 DYNLL1P63167 89 aaKnown RBP13.19□□□□□ -0.3
SNF8-207ENST00000509995 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
SNF8-207ENST00000509995 TRIM67Q6ZTA4 783 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 FBXL6Q8N531 539 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 MAGEB6Q8N7X4 407 aa13.19□□□□□ -0.3
SNF8-207ENST00000509995 PABPC5Q96DU9 382 aaKnown RBP13.19□□□□□ -0.3
SNF8-207ENST00000509995 TRMT13Q9NUP7 481 aaKnown RBP13.19□□□□□ -0.3
SNF8-207ENST00000509995 TNKSO95271 1327 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 PRR23AA6NEV1 266 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 VWA5AO00534 786 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 MPHOSPH10O00566 681 aaKnown RBP13.18□□□□□ -0.3
SNF8-207ENST00000509995 SUPT20HL2P0C7V6 817 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 USP5P45974 858 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 TFCP2Q12800 502 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 GORABQ5T7V8 394 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 ARMCX2Q7L311 632 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 TMCO2Q7Z6W1 182 aaPredicted RBP13.18□□□□□ -0.3
SNF8-207ENST00000509995 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 TLK2Q86UE8 772 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 REPS2Q8NFH8 660 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 DDX11Q96FC9 970 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 FGD4Q96M96 766 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 NEUROD6Q96NK8 337 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 ZBED2Q9BTP6 218 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 FTOQ9C0B1 505 aaKnown RBP eCLIP13.18□□□□□ -0.3
SNF8-207ENST00000509995 KATNBL1Q9H079 304 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
SNF8-207ENST00000509995 TRIP12Q14669 1992 aaPredicted RBP13.18□□□□□ -0.3
SNF8-207ENST00000509995 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 LINC01553A4QN01 128 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 PLCD1P51178 756 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 WDR5P61964 334 aaKnown RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 TIGD5Q53EQ6 642 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 FSD1Q9BTV5 496 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 GNEQ9Y223 722 aaKnown RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
SNF8-207ENST00000509995 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 WDR87Q6ZQQ6 2873 aa13.17□□□□□ -0.3
SNF8-207ENST00000509995 PTPRCP08575 1304 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
SNF8-207ENST00000509995 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 ZEB2O60315 1214 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 RGS20O76081 388 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 VCPP55072 806 aaKnown RBP13.16□□□□□ -0.3
SNF8-207ENST00000509995 TNFAIP2Q03169 654 aa13.16□□□□□ -0.3
SNF8-207ENST00000509995 GABPAQ06546 454 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms