RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 KBTBD13C9JR72 458 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 ZBTB5O15062 677 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 PSAPP07602 524 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 KLRK1P26718 216 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 LIFRP42702 1097 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 TTLL4Q14679 1199 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SPDYE2Q495Y8 402 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 C3orf67Q6ZVT6 689 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 CEP95Q96GE4 821 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 FAM193BQ96PV7 902 aaPredicted RBP5.76□□□□□ -1.49
PHF3-210ENST00000509876 FNBP1Q96RU3 617 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 MMRN2Q9H8L6 949 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SH3GLB2Q9NR46 395 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 WDR19Q8NEZ3 1342 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 PEAK1Q9H792 1746 aa5.76□□□□□ -1.49
PHF3-210ENST00000509876 SOCS7O14512 581 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PRAMEF18Q5VWM3 479 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 MAP1SQ66K74 1059 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 CNNM4Q6P4Q7 775 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 CCAR2Q8N163 923 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 NEDD1Q8NHV4 660 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 IWS1Q96ST2 819 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 TMEM47Q9BQJ4 181 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 WDR11Q9BZH6 1224 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 BCL2L12Q9HB09 334 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PRPF3O43395 683 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 SSR1P43307 286 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 NASPP49321 788 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 POLGP54098 1239 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 GSE1Q14687 1217 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 XKR9Q5GH70 373 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 FAM102BQ5T8I3 360 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 CABP7Q86V35 215 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 NSUN6Q8TEA1 469 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 PLIN2Q99541 437 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 ZSWIM5Q9P217 1185 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 LAD1O00515 517 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 CUTAO60888 179 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 HARSP12081 509 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 AKR1B1P15121 316 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PDIA3P30101 505 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 USP8P40818 1118 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 IGBP1P78318 339 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 LRCH2Q5VUJ6 765 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 KCNV1Q6PIU1 500 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 APOA5Q6Q788 366 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 FAM83AQ86UY5 434 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 SLC17A8Q8NDX2 589 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 GPRC5DQ9NZD1 345 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 NYAP2Q9P242 653 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 ELP1O95163 1332 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 GSG1L2A8MUP6 293 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 F5H6K3 240 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 SETD1AO15047 1707 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 KLRC3Q07444 240 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 FAM205AQ6ZU69 1335 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 NLGN2Q8NFZ4 835 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 NEDD4P46934 1319 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 GLTPD2A6NH11 291 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 VIL1P09327 827 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 OR52Z1P0C646 297 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 RCAN1P53805 252 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PPP4CP60510 307 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 GRM4Q14833 912 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 INF2Q27J81 1249 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 C15orf52Q6ZUT6 534 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 MYCT1Q8N699 235 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 ZC3H15Q8WU90 426 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 ADPGKQ9BRR6 497 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 SYNCQ9H7C4 482 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 RTEL1Q9NZ71 1219 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 TLR3O15455 904 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 MCM4P33991 863 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 TNNT3P45378 269 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 GCLCP48506 637 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 YARSP54577 528 aaKnown RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 PPP2R5AQ15172 486 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 MSANTD4Q8NCY6 345 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 CDCA5Q96FF9 252 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PRMT6Q96LA8 375 aaPredicted RBP5.75□□□□□ -1.49
PHF3-210ENST00000509876 PCDHA12Q9UN75 941 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 PLCH1Q4KWH8 1693 aa5.75□□□□□ -1.49
PHF3-210ENST00000509876 ERLIN2O94905 339 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 CAVIN2O95810 425 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 EPB41P11171 864 aaKnown RBP5.74□□□□□ -1.49
PHF3-210ENST00000509876 ABCD1P33897 745 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 FKBP1BP68106 108 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 SPAG1Q07617 926 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 ERO1AQ96HE7 468 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 CTAGE1Q96RT6 745 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 SEPT9Q9UHD8 586 aaPredicted RBP5.74□□□□□ -1.49
PHF3-210ENST00000509876 PFASO15067 1338 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 SPA17Q15506 151 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 EEPD1Q7L9B9 569 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 REM2Q8IYK8 340 aaPredicted RBP5.74□□□□□ -1.49
PHF3-210ENST00000509876 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
PHF3-210ENST00000509876 NUDT12Q9BQG2 462 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms