RNA–Protein interactions for RNA: ENST00000509828.1

MBD4-208, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-208ENST00000509828 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 AAK1Q2M2I8 961 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 CCSAPQ6IQ19 270 aaPredicted RBP12.38□□□□□ -0.43
MBD4-208ENST00000509828 ARMCX2Q7L311 632 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 RPUSD2Q8IZ73 545 aaKnown RBP12.38□□□□□ -0.43
MBD4-208ENST00000509828 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 REPS2Q8NFH8 660 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 ZNF287Q9HBT7 754 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 NYAP2Q9P242 653 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 FEM1BQ9UK73 627 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 SLC4A7Q9Y6M7 1214 aa12.38□□□□□ -0.43
MBD4-208ENST00000509828 TTC28Q96AY4 2481 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 CABYRO75952 493 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 APPP05067 770 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 MS4A1P11836 297 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 ATP5JP18859 108 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 CCL23P55773 120 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 PPP2R2DQ66LE6 453 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 CXCL17Q6UXB2 119 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 FAM126BQ8IXS8 530 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 RPAP2Q8IXW5 612 aaPredicted RBP12.37□□□□□ -0.43
MBD4-208ENST00000509828 CCDC144CPQ8IYA2 1237 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 PANK1Q8TE04 598 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 UPF3AQ9H1J1 476 aaKnown RBP12.37□□□□□ -0.43
MBD4-208ENST00000509828 SMCHD1A6NHR9 2005 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 A0A0G2JMZ2 1700 aa12.37□□□□□ -0.43
MBD4-208ENST00000509828 ASB14A6NK59 587 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
MBD4-208ENST00000509828 GTPBP6O43824 516 aaPredicted RBP12.36□□□□□ -0.43
MBD4-208ENST00000509828 ITGA7Q13683 1181 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 RASIP1Q5U651 963 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 HAUS7Q99871 368 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 C1QTNF1Q9BXJ1 281 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 CXXC1Q9P0U4 656 aaPredicted RBP12.36□□□□□ -0.43
MBD4-208ENST00000509828 COG6Q9Y2V7 657 aa12.36□□□□□ -0.43
MBD4-208ENST00000509828 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 RASA1P20936 1047 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 TDO2P48775 406 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 RABGGTBP53611 331 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 OAZ1P54368 228 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 CNTN2Q02246 1040 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
MBD4-208ENST00000509828 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 CHMP4CQ96CF2 233 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 SEZ6LQ9BYH1 1024 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 PUS7LQ9H0K6 701 aaKnown RBP12.35□□□□□ -0.43
MBD4-208ENST00000509828 TRPV6Q9H1D0 765 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 ACAD9Q9H845 621 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 SLC38A10Q9HBR0 1119 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 ZNFX1Q9P2E3 1918 aaKnown RBP12.35□□□□□ -0.43
MBD4-208ENST00000509828 ZBED9Q6R2W3 1325 aa12.35□□□□□ -0.43
MBD4-208ENST00000509828 TMEM232C9JQI7 657 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 ADCY6O43306 1168 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 CD4P01730 458 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 FDX1P10109 184 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 BMP3P12645 472 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 PLA2G5P39877 138 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 HNRNPUQ00839 825 aaKnown RBP eCLIP12.34□□□□□ -0.43
MBD4-208ENST00000509828 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 SLFN13Q68D06 897 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.34□□□□□ -0.43
MBD4-208ENST00000509828 CHMP4BQ9H444 224 aaKnown RBP12.34□□□□□ -0.43
MBD4-208ENST00000509828 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
MBD4-208ENST00000509828 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
MBD4-208ENST00000509828 PCDHA11Q9Y5I1 949 aa12.34□□□□□ -0.43
MBD4-208ENST00000509828 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 PRDM1O75626 825 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 TTLL1O95922 423 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 CHGBP05060 677 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 SLC3A2P08195 630 aaKnown RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 TSPY3P0CV98 308 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 TSPY8P0CW00 308 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 ACTN1P12814 892 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 ALAS1P13196 640 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 PSMC6P62333 389 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 IQSEC1Q6DN90 963 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 EEPD1Q7L9B9 569 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 LRRC47Q8N1G4 583 aaKnown RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 NECAB3Q96P71 396 aaPredicted RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 STRBPQ96SI9 672 aaKnown RBP12.33□□□□□ -0.44
MBD4-208ENST00000509828 RNF146Q9NTX7 359 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 UMODL1Q5DID0 1318 aa12.33□□□□□ -0.44
MBD4-208ENST00000509828 SUPT20HL2P0C7V6 817 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 MYOGP15173 224 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 STAT2P52630 851 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 TFF2Q03403 129 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 SCLYQ96I15 445 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 AGBL1Q96MI9 1066 aa12.32□□□□□ -0.44
MBD4-208ENST00000509828 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms