RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 VGLL2Q8N8G2 317 aa9.23□□□□□ -0.93
CCSER1-208ENST00000509109 LPIN2Q92539 896 aa9.23□□□□□ -0.93
CCSER1-208ENST00000509109 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
CCSER1-208ENST00000509109 CIAO1O76071 339 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 DGKGP49619 791 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 BTLAQ7Z6A9 289 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 DZIP1LQ8IYY4 767 aaKnown RBP9.22□□□□□ -0.93
CCSER1-208ENST00000509109 TRMT2AQ8IZ69 625 aaKnown RBP9.22□□□□□ -0.93
CCSER1-208ENST00000509109 WDR66Q8TBY9 1149 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 WNK4Q96J92 1243 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 GNL3LQ9NVN8 582 aaKnown RBP9.22□□□□□ -0.93
CCSER1-208ENST00000509109 ZNF70Q9UC06 446 aaPredicted RBP9.22□□□□□ -0.93
CCSER1-208ENST00000509109 KCNH4Q9UQ05 1017 aa9.22□□□□□ -0.93
CCSER1-208ENST00000509109 RPAP1Q9BWH6 1393 aaPredicted RBP9.22□□□□□ -0.93
CCSER1-208ENST00000509109 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.21□□□□□ -0.94
CCSER1-208ENST00000509109 COL8A1P27658 744 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 RGS19P49795 217 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 RTN1Q16799 776 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 NBPF12Q5TAG4 269 aaPredicted RBP9.21□□□□□ -0.94
CCSER1-208ENST00000509109 FKBP1CQ5VVH2 108 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 KLHDC4Q8TBB5 520 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
CCSER1-208ENST00000509109 ARHGAP45Q92619 1136 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 ZDHHC15Q96MV8 337 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 MRIQ9BWK5 157 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 TDRD3Q9H7E2 651 aaKnown RBP9.21□□□□□ -0.94
CCSER1-208ENST00000509109 KLK14Q9P0G3 267 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.94
CCSER1-208ENST00000509109 PCDHAC2Q9Y5I4 1007 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 CSADQ9Y600 493 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 PDE4DIPQ5VU43 2346 aa9.21□□□□□ -0.94
CCSER1-208ENST00000509109 ELOA3CA0A087WX78 387 aaPredicted RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 ELOA3DA6NLF2 546 aaPredicted RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 TCP10L2B9ZVM9 353 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 IPO8O15397 1037 aaKnown RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 FKTNO75072 461 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 WDHD1O75717 1129 aaPredicted RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 GNAI3P08754 354 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 FGFR2P21802 821 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 WEE1P30291 646 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 IL15P40933 162 aaPredicted RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 ATP2B3Q16720 1220 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 ELOA3BQ3SY89 546 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 FAM83AQ86UY5 434 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 ZGPATQ8N5A5 531 aaKnown RBP9.2□□□□□ -0.94
CCSER1-208ENST00000509109 ELOA3Q8NG57 546 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 CLMNQ96JQ2 1002 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 SIL1Q9H173 461 aa9.2□□□□□ -0.94
CCSER1-208ENST00000509109 DOCK2Q92608 1830 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 AK9Q5TCS8 1911 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 SIN3BO75182 1162 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 ITGB2P05107 769 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 RFX5P48382 616 aaPredicted RBP9.19□□□□□ -0.94
CCSER1-208ENST00000509109 DCAF15Q66K64 600 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 FBXO46Q6PJ61 603 aaPredicted RBP9.19□□□□□ -0.94
CCSER1-208ENST00000509109 HHIPL2Q6UWX4 724 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 BHMTQ93088 406 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 VTI1AQ96AJ9 217 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 PRIMPOLQ96LW4 560 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 DENND2AQ9ULE3 1009 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 FZD1Q9UP38 647 aa9.19□□□□□ -0.94
CCSER1-208ENST00000509109 LRRFIP2Q9Y608 721 aaKnown RBP9.19□□□□□ -0.94
CCSER1-208ENST00000509109 KRBA1A5PL33 1030 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 GNB5O14775 395 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 USP2O75604 605 aaPredicted RBP9.18□□□□□ -0.94
CCSER1-208ENST00000509109 ALAS2P22557 587 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 GTF2A2P52657 109 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 RARSP54136 660 aaKnown RBP9.18□□□□□ -0.94
CCSER1-208ENST00000509109 AOX1Q06278 1338 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 TBC1D8BQ0IIM8 1120 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 VGLL4Q14135 290 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 HIF1AQ16665 826 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
CCSER1-208ENST00000509109 INTS3Q68E01 1043 aaKnown RBP9.18□□□□□ -0.94
CCSER1-208ENST00000509109 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.18□□□□□ -0.94
CCSER1-208ENST00000509109 STK32AQ8WU08 396 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 OPTNQ96CV9 577 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 ERO1AQ96HE7 468 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 TEPSINQ96N21 525 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 ELP3Q9H9T3 547 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 COPRSQ9NQ92 184 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 SALL1Q9NSC2 1324 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 ZMIZ1Q9ULJ6 1067 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 AKAP2Q9Y2D5 859 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 BRCA2P51587 3418 aa9.18□□□□□ -0.94
CCSER1-208ENST00000509109 MYH2Q9UKX2 1941 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 IGF2BP3O00425 579 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCSER1-208ENST00000509109 SRGAP3O43295 1099 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 PRMT3O60678 531 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 LDHBP07195 334 aaKnown RBP9.17□□□□□ -0.94
CCSER1-208ENST00000509109 ARHGEF6Q15052 776 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 WRNIP1Q96S55 665 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 MEIS3Q99687 375 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 IGFLR1Q9H665 355 aa9.17□□□□□ -0.94
CCSER1-208ENST00000509109 TGFBR3LH3BV60 316 aa9.16□□□□□ -0.94
CCSER1-208ENST00000509109 CACNB3P54284 484 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms