RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SYNGAP1Q96PV0 1343 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 KBTBD13C9JR72 458 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 RARBP10826 455 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 ALAS1P13196 640 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 CHMLP26374 656 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 PRAMEF19Q5SWL8 479 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 SYDE2Q5VT97 1194 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 ZNF467Q7Z7K2 595 aaPredicted RBP21.9■■□□□ 1.1
UBE3D-207ENST00000509102 TRERF1Q96PN7 1200 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 UBAC1Q9BSL1 405 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 KAT14Q9H8E8 782 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 GPCPD1Q9NPB8 672 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 CCPG1Q9ULG6 757 aa21.9■■□□□ 1.1
UBE3D-207ENST00000509102 PFASO15067 1338 aa21.89■■□□□ 1.1
UBE3D-207ENST00000509102 FRMPD2Q68DX3 1309 aaPredicted RBP21.89■■□□□ 1.1
UBE3D-207ENST00000509102 DNAJC25-GNG10A0A024R161 153 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 B4E1Z4 1266 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.09
UBE3D-207ENST00000509102 PDHBP11177 359 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 COL6A1P12109 1028 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 GPATCH4Q5T3I0 446 aaKnown RBP21.89■■□□□ 1.09
UBE3D-207ENST00000509102 BTNL9Q6UXG8 535 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 CENPQQ7L2Z9 268 aaPredicted RBP21.89■■□□□ 1.09
UBE3D-207ENST00000509102 C7orf61Q8IZ16 206 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 AGBL1Q96MI9 1066 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 ZSCAN10Q96SZ4 725 aaPredicted RBP21.89■■□□□ 1.09
UBE3D-207ENST00000509102 U3KPZ7 1027 aaPredicted RBP21.89■■□□□ 1.09
UBE3D-207ENST00000509102 PLXNA1Q9UIW2 1896 aa21.89■■□□□ 1.09
UBE3D-207ENST00000509102 POTEB2H3BUK9 544 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 ICAM1P05362 532 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 AKR1A1P14550 325 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 SLC16A2P36021 539 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 HABP4Q5JVS0 413 aaKnown RBP21.88■■□□□ 1.09
UBE3D-207ENST00000509102 ANO1Q5XXA6 986 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 CHRDL2Q6WN34 429 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 RASGRP2Q7LDG7 609 aa21.88■■□□□ 1.09
UBE3D-207ENST00000509102 SENP6Q9GZR1 1112 aaPredicted RBP21.88■■□□□ 1.09
UBE3D-207ENST00000509102 FRMPD3Q5JV73 1810 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 ZNF536O15090 1300 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 ZNF543Q08ER8 600 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 MAMDC4Q6UXC1 1216 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 PNMA1Q8ND90 353 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 RANBP17Q9H2T7 1088 aaKnown RBP21.87■■□□□ 1.09
UBE3D-207ENST00000509102 ZSWIM5Q9P217 1185 aa21.87■■□□□ 1.09
UBE3D-207ENST00000509102 COLQQ9Y215 455 aaPredicted RBP21.87■■□□□ 1.09
UBE3D-207ENST00000509102 SNAP25P60880 206 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 GJC2Q5T442 439 aaPredicted RBP21.86■■□□□ 1.09
UBE3D-207ENST00000509102 TTBK2Q6IQ55 1244 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 KIAA1211Q6ZU35 1233 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 RNF180Q86T96 592 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 A1CFQ9NQ94 594 aaKnown RBP21.86■■□□□ 1.09
UBE3D-207ENST00000509102 XPNPEP3Q9NQH7 507 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 ZHX1Q9UKY1 873 aaPredicted RBP21.86■■□□□ 1.09
UBE3D-207ENST00000509102 FAM184BQ9ULE4 1060 aa21.86■■□□□ 1.09
UBE3D-207ENST00000509102 TNKSO95271 1327 aa21.85■■□□□ 1.09
UBE3D-207ENST00000509102 SGSM2O43147 1006 aa21.85■■□□□ 1.09
UBE3D-207ENST00000509102 SNHG28P0DPA3 235 aa21.85■■□□□ 1.09
UBE3D-207ENST00000509102 RALYLQ86SE5 291 aaKnown RBP21.85■■□□□ 1.09
UBE3D-207ENST00000509102 IL25Q9H293 177 aa21.85■■□□□ 1.09
UBE3D-207ENST00000509102 ABHD16BQ9H3Z7 469 aa21.85■■□□□ 1.09
UBE3D-207ENST00000509102 ASB14A6NK59 587 aa21.84■■□□□ 1.09
UBE3D-207ENST00000509102 ZNF865P0CJ78 1059 aaPredicted RBP21.84■■□□□ 1.09
UBE3D-207ENST00000509102 IFIT1BQ5T764 474 aaKnown RBP21.84■■□□□ 1.09
UBE3D-207ENST00000509102 NSMFQ6X4W1 530 aa21.84■■□□□ 1.09
UBE3D-207ENST00000509102 ANKS1AQ92625 1134 aa21.84■■□□□ 1.09
UBE3D-207ENST00000509102 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.84■■□□□ 1.09
UBE3D-207ENST00000509102 ERICH2A1L162 156 aa21.83■■□□□ 1.09
UBE3D-207ENST00000509102 TAL1P17542 331 aaPredicted RBP21.83■■□□□ 1.09
UBE3D-207ENST00000509102 ACVR2BQ13705 512 aa21.83■■□□□ 1.09
UBE3D-207ENST00000509102 ASPRV1Q53RT3 343 aa21.83■■□□□ 1.09
UBE3D-207ENST00000509102 ARMCX2Q7L311 632 aa21.83■■□□□ 1.09
UBE3D-207ENST00000509102 ENAHQ8N8S7 591 aaPredicted RBP21.83■■□□□ 1.09
UBE3D-207ENST00000509102 SNAI1O95863 264 aaPredicted RBP21.82■■□□□ 1.08
UBE3D-207ENST00000509102 SART3Q15020 963 aaKnown RBP21.82■■□□□ 1.08
UBE3D-207ENST00000509102 LRRC41Q15345 812 aa21.82■■□□□ 1.08
UBE3D-207ENST00000509102 LRRC26Q2I0M4 334 aa21.82■■□□□ 1.08
UBE3D-207ENST00000509102 CCDC144CPQ8IYA2 1237 aa21.82■■□□□ 1.08
UBE3D-207ENST00000509102 FAM133AQ8N9E0 248 aa21.82■■□□□ 1.08
UBE3D-207ENST00000509102 SPC25Q9HBM1 224 aa21.82■■□□□ 1.08
UBE3D-207ENST00000509102 ZMYND8Q9ULU4 1186 aaPredicted RBP21.82■■□□□ 1.08
UBE3D-207ENST00000509102 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 DHX16O60231 1041 aaKnown RBP21.81■■□□□ 1.08
UBE3D-207ENST00000509102 CYP21A2P08686 494 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 PARP1P09874 1014 aaKnown RBP21.81■■□□□ 1.08
UBE3D-207ENST00000509102 GOLGA8HP0CJ92 632 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 ATN1P54259 1190 aaPredicted RBP21.81■■□□□ 1.08
UBE3D-207ENST00000509102 CNTN2Q02246 1040 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 PTH1RQ03431 593 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 MUM1L1Q5H9M0 696 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 MPHOSPH6Q99547 160 aaKnown RBP21.81■■□□□ 1.08
UBE3D-207ENST00000509102 CYP39A1Q9NYL5 469 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 ADD3Q9UEY8 706 aaKnown RBP21.81■■□□□ 1.08
UBE3D-207ENST00000509102 PRKAG2Q9UGJ0 569 aa21.81■■□□□ 1.08
UBE3D-207ENST00000509102 SLC34A2O95436 690 aa21.8■■□□□ 1.08
UBE3D-207ENST00000509102 NCOA7Q8NI08 942 aa21.8■■□□□ 1.08
UBE3D-207ENST00000509102 ALPK3Q96L96 1907 aa21.8■■□□□ 1.08
UBE3D-207ENST00000509102 PTPDC1A2A3K4 754 aa21.79■■□□□ 1.08
UBE3D-207ENST00000509102 DUSP11O75319 330 aaKnown RBP21.79■■□□□ 1.08
UBE3D-207ENST00000509102 PGK1P00558 417 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms