RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 ASCC2Q9H1I8 757 aaPredicted RBP12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 PHIPQ8WWQ0 1821 aa12.73□□□□□ -0.37
BRCC3P1-201ENST00000508559 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 CYTH3O43739 400 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 NAPAP54920 295 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 KIF23Q02241 960 aaPredicted RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 C1QBPQ07021 282 aaKnown RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 SAFBQ15424 915 aaKnown RBP eCLIP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 PFKFB3Q16875 520 aaPredicted RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 QRICH1Q2TAL8 776 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 USH1GQ495M9 461 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 CPXCR1Q8N123 301 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 MB21D1Q8N884 522 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 GTF3C2Q8WUA4 911 aaPredicted RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 PARK7Q99497 189 aaKnown RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 P2RX7Q99572 595 aaKnown RBP12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 PAGR1Q9BTK6 254 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 AMNQ9BXJ7 453 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 PNMA2Q9UL42 364 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 CCPG1Q9ULG6 757 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
BRCC3P1-201ENST00000508559 VPS37CA5D8V6 355 aaPredicted RBP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 FAM155AB1AL88 458 aaPredicted RBP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 hCG_1984214I3L0E3 225 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 VWA5AO00534 786 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 NLRP5P59047 1200 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 HERVK_113P62684 666 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 MOGSQ13724 837 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 CCAR1Q8IX12 1150 aaKnown RBP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 ZNF713Q8N859 430 aaPredicted RBP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 GPKOWQ92917 476 aaPredicted RBP eCLIP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.37
BRCC3P1-201ENST00000508559 BAZ2BQ9UIF8 2168 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 SPDYE16A6NNV3 312 aaPredicted RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 AOC2O75106 756 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 FDPSP14324 419 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 GUCY1B3Q02153 619 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 SLC35G1Q2M3R5 365 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 MCTP1Q6DN14 999 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 COA7Q96BR5 231 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 AIFM3Q96NN9 605 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 SLC38A10Q9HBR0 1119 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 MRPL11Q9Y3B7 192 aaKnown RBP12.7□□□□□ -0.38
BRCC3P1-201ENST00000508559 TESPA1A2RU30 521 aaPredicted RBP12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 ICAM1P05362 532 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 CYP2C8P10632 490 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 ALAS1P13196 640 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 HSPA6P17066 643 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 CALML3P27482 149 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 C1QTNF8P60827 252 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 HTRA3P83110 453 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 PKN1Q16512 942 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 WWC2Q6AWC2 1192 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 SNRNP48Q6IEG0 339 aaKnown RBP12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 PPP1R18Q6NYC8 613 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 CUL5Q93034 780 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 MTMR8Q96EF0 704 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 ZFYVE28Q9HCC9 887 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 C6orf50Q9HD87 102 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 SH3GLB2Q9NR46 395 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 HOMER2Q9NSB8 354 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 RABGAP1Q9Y3P9 1069 aa12.69□□□□□ -0.38
BRCC3P1-201ENST00000508559 ABCB11O95342 1321 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 STXBP3O00186 592 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 STX6O43752 255 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 SYT1P21579 422 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 GNA11P29992 359 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 STAT3P40763 770 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 VEGFBP49765 207 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 ADCY7P51828 1080 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 OAZ1P54368 228 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 CCNA1P78396 465 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 WDR78Q5VTH9 848 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 KRT40Q6A162 431 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 BICD2Q8TD16 824 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 FOXD4L4Q8WXT5 416 aaPredicted RBP12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 AGBL1Q96MI9 1066 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 PTPN18Q99952 460 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 TEX13BQ9BXU2 312 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 GLT8D2Q9H1C3 349 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 KCNJ14Q9UNX9 436 aa12.68□□□□□ -0.38
BRCC3P1-201ENST00000508559 LOC285556D6RIA3 1793 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms