RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 HSF5Q4G112 596 aaPredicted RBP8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 SIRT2Q8IXJ6 389 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 TINF2Q9BSI4 451 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 IGSF5Q9NSI5 407 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 SUSD2Q9UGT4 822 aa8.72□□□□□ -1.01
TOPBP1-206ENST00000508524 GSTM1P09488 218 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 KIR3DS1Q14943 382 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 HEATR6Q6AI08 1181 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 ADCY4Q8NFM4 1077 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 FGD4Q96M96 766 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 ZDHHC15Q96MV8 337 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 CRTAC1Q9NQ79 661 aa8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 SF3B6Q9Y3B4 125 aaKnown RBP8.71□□□□□ -1.02
TOPBP1-206ENST00000508524 FGF10O15520 208 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 VHLLQ6RSH7 139 aa8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 CILP2Q8IUL8 1156 aa8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 FCRL3Q96P31 734 aaPredicted RBP8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 DIS3Q9Y2L1 958 aaKnown RBP8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 MRVI1Q9Y6F6 885 aa8.7□□□□□ -1.02
TOPBP1-206ENST00000508524 A0A1W2PQ45 241 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 A0A1W2PQY0 241 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 CD3EP07766 207 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 IFNGR1P15260 489 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 PDE6BP35913 854 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 PPP2R5DQ14738 602 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 KIAA1211LQ6NV74 962 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 GALNT18Q6P9A2 607 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 ZNF605Q86T29 641 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 ZNF513Q8N8E2 541 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 GBP3Q9H0R5 595 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 ZNF552Q9H707 407 aaPredicted RBP8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 TAF6LQ9Y6J9 622 aa8.69□□□□□ -1.02
TOPBP1-206ENST00000508524 MYOCOSA0A1B0GUC4 107 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 SMAD7O15105 426 aaKnown RBP8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 FGRP09769 529 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 POU4F1Q01851 419 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 ADGRF1Q5T601 910 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 VPS37DQ86XT2 251 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 SLC26A8Q96RN1 970 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 JMJD8Q96S16 334 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 MCMBPQ9BTE3 642 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 MCOLN1Q9GZU1 580 aa8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 CGGBP1Q9UFW8 167 aaPredicted RBP8.68□□□□□ -1.02
TOPBP1-206ENST00000508524 PPM1BO75688 479 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 SSBP05455 408 aaKnown RBP eCLIP8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 C1QTNF9P0C862 333 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 PNLIPP16233 465 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 NOP2P46087 812 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 GNL2Q13823 731 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 ADAT2Q7Z6V5 191 aaKnown RBP8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 APEX2Q9UBZ4 518 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 ACSL6Q9UKU0 697 aa8.67□□□□□ -1.02
TOPBP1-206ENST00000508524 ANKRD34BA5PLL1 514 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 OR14I1A6ND48 311 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 ETV2O00321 342 aaPredicted RBP8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 PEX10O60683 326 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 MED14OSP0DP75 135 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 GLDCP23378 1020 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 RAP1GAPP47736 663 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 CYP2R1Q6VVX0 501 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 RCC1LQ96I51 464 aaKnown RBP8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 IMPACTQ9P2X3 320 aa8.66□□□□□ -1.02
TOPBP1-206ENST00000508524 PRKCAP17252 672 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 SDHBP21912 280 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 ETFBP38117 255 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 ERVFRD-1P60508 538 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 NUP43Q8NFH3 380 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 PTCHD1Q96NR3 888 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 KRTAP9-9Q9BYP9 154 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 KRTAP9-4Q9BYQ2 154 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 CD320Q9NPF0 282 aa8.65□□□□□ -1.02
TOPBP1-206ENST00000508524 STXBP3O00186 592 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 NFIBO00712 420 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 AURKAO14965 403 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 VAMP4O75379 141 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 TMEM253P0C7T8 217 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 ARID5AQ03989 594 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 FZD5Q13467 585 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 NCAPHQ15003 741 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 TNNI3KQ59H18 835 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 HLA-DQA1Q5Y7H0 255 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 MCF2L2Q86YR7 1114 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 TNFRSF12AQ9NP84 129 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 ACTR10Q9NZ32 417 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 PRKAG3Q9UGI9 489 aa8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 ARID1BQ8NFD5 2236 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-206ENST00000508524 HRKO00198 91 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 SEMA7AO75326 666 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 MVKQ03426 396 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 GRB10Q13322 594 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 DPY19L1Q2PZI1 675 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 ATG14Q6ZNE5 492 aa8.63□□□□□ -1.03
TOPBP1-206ENST00000508524 KCNN1Q92952 543 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms