RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
DDX41-209ENST00000508279 OLFML2BQ68BL8 750 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 NECAB2Q7Z6G3 386 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 RALYLQ86SE5 291 aaKnown RBP11.01□□□□□ -0.65
DDX41-209ENST00000508279 PNMA1Q8ND90 353 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 CHST13Q8NET6 341 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 TRERF1Q96PN7 1200 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 HTATIP2Q9BUP3 242 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 CPVLQ9H3G5 476 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 RNF146Q9NTX7 359 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 DDX20Q9UHI6 824 aaKnown RBP11.01□□□□□ -0.65
DDX41-209ENST00000508279 CCPG1Q9ULG6 757 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
DDX41-209ENST00000508279 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
DDX41-209ENST00000508279 ATP2A1O14983 1001 aa11□□□□□ -0.65
DDX41-209ENST00000508279 DHX16O60231 1041 aaKnown RBP11□□□□□ -0.65
DDX41-209ENST00000508279 PLA2G6O60733 806 aa11□□□□□ -0.65
DDX41-209ENST00000508279 CENPBP07199 599 aaPredicted RBP11□□□□□ -0.65
DDX41-209ENST00000508279 CYBAP13498 195 aa11□□□□□ -0.65
DDX41-209ENST00000508279 ZNF543Q08ER8 600 aa11□□□□□ -0.65
DDX41-209ENST00000508279 ZNF792Q3KQV3 632 aa11□□□□□ -0.65
DDX41-209ENST00000508279 IFIT1BQ5T764 474 aaKnown RBP11□□□□□ -0.65
DDX41-209ENST00000508279 CHST3Q7LGC8 479 aa11□□□□□ -0.65
DDX41-209ENST00000508279 DGKHQ86XP1 1220 aa11□□□□□ -0.65
DDX41-209ENST00000508279 ENAHQ8N8S7 591 aaPredicted RBP11□□□□□ -0.65
DDX41-209ENST00000508279 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
DDX41-209ENST00000508279 UBA5Q9GZZ9 404 aa11□□□□□ -0.65
DDX41-209ENST00000508279 ACAD9Q9H845 621 aa11□□□□□ -0.65
DDX41-209ENST00000508279 FBXO40Q9UH90 709 aa11□□□□□ -0.65
DDX41-209ENST00000508279 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
DDX41-209ENST00000508279 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
DDX41-209ENST00000508279 ZNF536O15090 1300 aa11□□□□□ -0.65
DDX41-209ENST00000508279 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
DDX41-209ENST00000508279 ERICH2A1L162 156 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 E7EWF7 191 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 IFIT3O14879 490 aaKnown RBP10.99□□□□□ -0.65
DDX41-209ENST00000508279 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 MUM1L1Q5H9M0 696 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 LHX8Q68G74 356 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 CASC1Q6TDU7 716 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 NCOA7Q8NI08 942 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 TINF2Q9BSI4 451 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 RANBP17Q9H2T7 1088 aaKnown RBP10.99□□□□□ -0.65
DDX41-209ENST00000508279 C11orf49Q9H6J7 331 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 VAT1LQ9HCJ6 419 aa10.99□□□□□ -0.65
DDX41-209ENST00000508279 ZHX1Q9UKY1 873 aaPredicted RBP10.99□□□□□ -0.65
DDX41-209ENST00000508279 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 EVI5O60447 810 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 MSCO60682 206 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 ICAM1P05362 532 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 PARP1P09874 1014 aaKnown RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 CNTN2Q02246 1040 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 TKFCQ3LXA3 575 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 USH1GQ495M9 461 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 GPATCH4Q5T3I0 446 aaKnown RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 GJC2Q5T442 439 aaPredicted RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 BTNL9Q6UXG8 535 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 STOX1Q6ZVD7 989 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 UBE2Q1Q7Z7E8 422 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 ANKLE1Q8NAG6 615 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 LSG1Q9H089 658 aaKnown RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 A1CFQ9NQ94 594 aaKnown RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 CNPY2Q9Y2B0 182 aa10.98□□□□□ -0.65
DDX41-209ENST00000508279 DIS3Q9Y2L1 958 aaKnown RBP10.98□□□□□ -0.65
DDX41-209ENST00000508279 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 H0YGN5 161 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 SEPT4O43236 478 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 CDC45O75419 566 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 SNHG28P0DPA3 235 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 CAPN2P17655 700 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 NT5C2P49902 561 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 MNX1P50219 401 aaPredicted RBP10.97□□□□□ -0.65
DDX41-209ENST00000508279 WTAPQ15007 396 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 SART3Q15020 963 aaKnown RBP10.97□□□□□ -0.65
DDX41-209ENST00000508279 TMEM67Q5HYA8 995 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 C7orf61Q8IZ16 206 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 LENG1Q96BZ8 264 aaPredicted RBP10.97□□□□□ -0.65
DDX41-209ENST00000508279 SENP6Q9GZR1 1112 aaPredicted RBP10.97□□□□□ -0.65
DDX41-209ENST00000508279 LCTP09848 1927 aa10.97□□□□□ -0.65
DDX41-209ENST00000508279 CEP290O15078 2479 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 PFASO15067 1338 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 KBTBD13C9JR72 458 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 NFIBO00712 420 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 SLC27A2O14975 620 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 IGHA2P01877 340 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 RARBP10826 455 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 CALML3P27482 149 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 ATN1P54259 1190 aaPredicted RBP10.96□□□□□ -0.65
DDX41-209ENST00000508279 SEC23AQ15436 765 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 CDC37Q16543 378 aaPredicted RBP10.96□□□□□ -0.65
DDX41-209ENST00000508279 ASPRV1Q53RT3 343 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 CREB3L3Q68CJ9 461 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 ARMCX2Q7L311 632 aa10.96□□□□□ -0.65
DDX41-209ENST00000508279 CCDC144CPQ8IYA2 1237 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms