RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 DNAH12Q6ZR08 3092 aa24.63■■□□□ 1.53
CLDND1-216ENST00000507944 NOVP48745 357 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 NUCB1Q02818 461 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 SNX17Q15036 470 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 LRIT3Q3SXY7 679 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 RRP12Q5JTH9 1297 aaKnown RBP24.62■■□□□ 1.53
CLDND1-216ENST00000507944 FAM184BQ9ULE4 1060 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 PHF24Q9UPV7 400 aa24.62■■□□□ 1.53
CLDND1-216ENST00000507944 CCDC171Q6TFL3 1326 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 TRIM60Q495X7 471 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 LENG1Q96BZ8 264 aaPredicted RBP24.61■■□□□ 1.53
CLDND1-216ENST00000507944 AGBL1Q96MI9 1066 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 OSBPL3Q9H4L5 887 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 ACAD9Q9H845 621 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 ZHX1Q9UKY1 873 aaPredicted RBP24.61■■□□□ 1.53
CLDND1-216ENST00000507944 MTMR7Q9Y216 660 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 ZNF536O15090 1300 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 ZMYM6O95789 1325 aa24.61■■□□□ 1.53
CLDND1-216ENST00000507944 SDSP20132 328 aa24.6■■□□□ 1.53
CLDND1-216ENST00000507944 TKFCQ3LXA3 575 aa24.6■■□□□ 1.53
CLDND1-216ENST00000507944 C1orf53Q5VUE5 145 aa24.6■■□□□ 1.53
CLDND1-216ENST00000507944 FGD4Q96M96 766 aa24.6■■□□□ 1.53
CLDND1-216ENST00000507944 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.6■■□□□ 1.53
CLDND1-216ENST00000507944 PRR12Q9ULL5 1215 aa24.6■■□□□ 1.53
CLDND1-216ENST00000507944 HAND2P61296 217 aa24.59■■□□□ 1.53
CLDND1-216ENST00000507944 ACVR2BQ13705 512 aa24.59■■□□□ 1.53
CLDND1-216ENST00000507944 RASGRP2Q7LDG7 609 aa24.59■■□□□ 1.53
CLDND1-216ENST00000507944 RNF146Q9NTX7 359 aa24.59■■□□□ 1.53
CLDND1-216ENST00000507944 TCP11L1Q9NUJ3 509 aa24.59■■□□□ 1.53
CLDND1-216ENST00000507944 POTEB2H3BUK9 544 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 ADAMTS4O75173 837 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 TOP1P11387 765 aaKnown RBP24.58■■□□□ 1.53
CLDND1-216ENST00000507944 MFAP1P55081 439 aaKnown RBP24.58■■□□□ 1.53
CLDND1-216ENST00000507944 SNAP25P60880 206 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 CNTN2Q02246 1040 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 CCDC96Q2M329 555 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 CCDC174Q6PII3 467 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 DCAF4Q8WV16 495 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 TRERF1Q96PN7 1200 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 ABHD16BQ9H3Z7 469 aa24.58■■□□□ 1.53
CLDND1-216ENST00000507944 PRDM5Q9NQX1 630 aaPredicted RBP24.58■■□□□ 1.53
CLDND1-216ENST00000507944 ALAS1P13196 640 aa24.57■■□□□ 1.52
CLDND1-216ENST00000507944 GPR153Q6NV75 609 aa24.57■■□□□ 1.52
CLDND1-216ENST00000507944 ARMCX2Q7L311 632 aa24.57■■□□□ 1.52
CLDND1-216ENST00000507944 FAM133AQ8N9E0 248 aa24.57■■□□□ 1.52
CLDND1-216ENST00000507944 TMEM47Q9BQJ4 181 aa24.57■■□□□ 1.52
CLDND1-216ENST00000507944 TSEN34Q9BSV6 310 aaKnown RBP24.57■■□□□ 1.52
CLDND1-216ENST00000507944 A1CFQ9NQ94 594 aaKnown RBP24.57■■□□□ 1.52
CLDND1-216ENST00000507944 DUSP11O75319 330 aaKnown RBP24.56■■□□□ 1.52
CLDND1-216ENST00000507944 TLE2Q04725 743 aa24.56■■□□□ 1.52
CLDND1-216ENST00000507944 AKNAD1Q5T1N1 836 aa24.56■■□□□ 1.52
CLDND1-216ENST00000507944 MFSD6Q6ZSS7 791 aa24.56■■□□□ 1.52
CLDND1-216ENST00000507944 CCDC144CPQ8IYA2 1237 aa24.56■■□□□ 1.52
CLDND1-216ENST00000507944 SYNRGQ9UMZ2 1314 aa24.56■■□□□ 1.52
CLDND1-216ENST00000507944 A0A1W2PQ45 241 aaPredicted RBP24.55■■□□□ 1.52
CLDND1-216ENST00000507944 A0A1W2PQY0 241 aa24.55■■□□□ 1.52
CLDND1-216ENST00000507944 PCP11498 1178 aaKnown RBP24.55■■□□□ 1.52
CLDND1-216ENST00000507944 CCDC144BQ3MJ40 725 aa24.55■■□□□ 1.52
CLDND1-216ENST00000507944 TTBK2Q6IQ55 1244 aa24.55■■□□□ 1.52
CLDND1-216ENST00000507944 KLHDC9Q8NEP7 349 aa24.55■■□□□ 1.52
CLDND1-216ENST00000507944 PDLIM7Q9NR12 457 aa24.55■■□□□ 1.52
CLDND1-216ENST00000507944 SLC16A2P36021 539 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 ACLYP53396 1101 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 KCNA10Q16322 511 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 CWC27Q6UX04 472 aaKnown RBP24.54■■□□□ 1.52
CLDND1-216ENST00000507944 BTNL9Q6UXG8 535 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 SH3RF1Q7Z6J0 888 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 TTC14Q96N46 770 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 RNF41Q9H4P4 317 aaPredicted RBP24.54■■□□□ 1.52
CLDND1-216ENST00000507944 DIAPH3Q9NSV4 1193 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 CCPG1Q9ULG6 757 aa24.54■■□□□ 1.52
CLDND1-216ENST00000507944 TRIM43BA6NCK2 446 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 SOWAHBA6NEL2 793 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 MUM1L1Q5H9M0 696 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 CCSAPQ6IQ19 270 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-216ENST00000507944 TBC1D10CQ8IV04 446 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 TRIM43Q96BQ3 446 aaPredicted RBP24.53■■□□□ 1.52
CLDND1-216ENST00000507944 KATNBL1Q9H079 304 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 RANBP17Q9H2T7 1088 aaKnown RBP24.53■■□□□ 1.52
CLDND1-216ENST00000507944 GPCPD1Q9NPB8 672 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 SUPT16HQ9Y5B9 1047 aaKnown RBP24.53■■□□□ 1.52
CLDND1-216ENST00000507944 LTBP2Q14767 1821 aa24.53■■□□□ 1.52
CLDND1-216ENST00000507944 MOXD2PA6NHM9 499 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 ASB14A6NK59 587 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 HIP1O00291 1037 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 ZNF213O14771 459 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 ADCY6O43306 1168 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 ICAM1P05362 532 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 SYDE2Q5VT97 1194 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 NUP133Q8WUM0 1156 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 BADQ92934 168 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 SPC25Q9HBM1 224 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 STARD7Q9NQZ5 370 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 CYP39A1Q9NYL5 469 aa24.52■■□□□ 1.52
CLDND1-216ENST00000507944 FRMPD2Q68DX3 1309 aaPredicted RBP24.52■■□□□ 1.52
CLDND1-216ENST00000507944 MYADML2A6NDP7 307 aa24.51■■□□□ 1.51
CLDND1-216ENST00000507944 C6orf222P0C671 652 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-216ENST00000507944 CST5P28325 142 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-216ENST00000507944 IRX5P78411 483 aaPredicted RBP24.51■■□□□ 1.51
CLDND1-216ENST00000507944 DEFB123Q8N688 67 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms