RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 GPR55Q9Y2T6 319 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P28-201ENST00000507778 CD3EP07766 207 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 SNRPB2P08579 225 aaKnown RBP5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 FURINP09958 794 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 VAV1P15498 845 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 KCNJ6P48051 423 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 PCBP3P57721 371 aaKnown RBP5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 TAF7LQ5H9L4 462 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 PRSS36Q5K4E3 855 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 KIAA0907Q7Z7F0 614 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 USHBP1Q8N6Y0 703 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 LINC00116Q8NCU8 138 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 KISS1RQ969F8 398 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 OSBP2Q969R2 916 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 FEZ1Q99689 392 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 SEMA3GQ9NS98 782 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 DUSP13Q9UII6 198 aa5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 MRPS23Q9Y3D9 190 aaKnown RBP5.9□□□□□ -1.46
HMGB1P28-201ENST00000507778 DNAJC25-GNG10A0A024R161 153 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 ANKRD62A6NC57 917 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 AURKAO14965 403 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 PPP1R12AO14974 1030 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 DLX3O60479 287 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 CPP00450 1065 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 TGFB1P01137 390 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 SYPP08247 313 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 HOXA10P31260 410 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 GFRA1P56159 465 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 SUMO1P63165 101 aaKnown RBP5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 SF1Q15637 639 aaKnown RBP5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 GAB4Q2WGN9 574 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 TMPRSS7Q7RTY8 843 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 CREG2Q8IUH2 290 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 KCTD13Q8WZ19 329 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 HRASLS5Q96KN8 279 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 FCRL3Q96P31 734 aaPredicted RBP5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 VAV3Q9UKW4 847 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 PITPNM2Q9BZ72 1349 aa5.89□□□□□ -1.47
HMGB1P28-201ENST00000507778 STXBP3O00186 592 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 ZNF205O95201 554 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 SCG5P05408 212 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 NCLP19338 710 aaKnown RBP5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 LTKP29376 864 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 GRIK1P39086 918 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 ECI1P42126 302 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 GYS2P54840 703 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 PRKCQQ04759 706 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 SCRN1Q12765 414 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 MAP4K2Q12851 820 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 AOC3Q16853 763 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 TKFCQ3LXA3 575 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 RNF111Q6ZNA4 994 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 ASB11Q8WXH4 323 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 MCMBPQ9BTE3 642 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 SLC12A9Q9BXP2 914 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 TCFL5Q9UL49 500 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 RNF112Q9ULX5 631 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 BACE2Q9Y5Z0 518 aa5.88□□□□□ -1.47
HMGB1P28-201ENST00000507778 C2orf71A6NGG8 1288 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 PLD2O14939 933 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 GSTM1P09488 218 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 SEPHS1P49903 392 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 INTS5Q6P9B9 1019 aaKnown RBP5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 TMEM145Q8NBT3 493 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 COPS5Q92905 334 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 MISP3Q96FF7 219 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 FOXP3Q9BZS1 431 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 NCOA5Q9HCD5 579 aaKnown RBP5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 PCDHA11Q9Y5I1 949 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 CD2APQ9Y5K6 639 aa5.87□□□□□ -1.47
HMGB1P28-201ENST00000507778 RFPL3O75679 317 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 ESR1P03372 595 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 IFNGR1P15260 489 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 ENDOUP21128 410 aaKnown RBP5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 RNF187Q5TA31 235 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 EEF1DP3Q658K8 133 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 RCSD1Q6JBY9 416 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 MRPL4Q9BYD3 311 aaKnown RBP5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 GPRC5CQ9NQ84 441 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 BSDC1Q9NW68 430 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 PRKAB1Q9Y478 270 aa5.86□□□□□ -1.47
HMGB1P28-201ENST00000507778 FKTNO75072 461 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 COBLO75128 1261 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 THBDP07204 575 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 GABREP78334 506 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 EGR3Q06889 387 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 CYP4F3Q08477 520 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 BNIP3Q12983 259 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 IKZF1Q13422 519 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 CBX2Q14781 532 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 C21orf62-AS1Q17RA5 79 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 MSMPQ1L6U9 139 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 PRSS53Q2L4Q9 553 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 FNDC3BQ53EP0 1204 aaKnown RBP5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 DALRD3Q5D0E6 543 aaKnown RBP5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 RTP2Q5QGT7 225 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 SLC35F1Q5T1Q4 408 aa5.85□□□□□ -1.47
HMGB1P28-201ENST00000507778 USP53Q70EK8 1073 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms