RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 TMEFF1Q8IYR6 380 aa8.12□□□□□ -1.11
LINC01088-203ENST00000507476 JMJD8Q96S16 334 aa8.12□□□□□ -1.11
LINC01088-203ENST00000507476 TNFRSF12AQ9NP84 129 aa8.12□□□□□ -1.11
LINC01088-203ENST00000507476 ABLIM1O14639 778 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 GSNP06396 782 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 LAPTM5Q13571 262 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 LCE5AQ5TCM9 118 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 PPFIBP1Q86W92 1011 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 NUP43Q8NFH3 380 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 DHRS1Q96LJ7 313 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 SLC12A9Q9BXP2 914 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 IMPACTQ9P2X3 320 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 ADAMTS20P59510 1910 aa8.11□□□□□ -1.11
LINC01088-203ENST00000507476 ZNF16P17020 682 aaPredicted RBP8.1□□□□□ -1.11
LINC01088-203ENST00000507476 ARL4AP40617 200 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 AFF3P51826 1226 aaKnown RBP8.1□□□□□ -1.11
LINC01088-203ENST00000507476 PMS1P54277 932 aaKnown RBP8.1□□□□□ -1.11
LINC01088-203ENST00000507476 CYP4F8P98187 520 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 RAB3GAP1Q15042 981 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
LINC01088-203ENST00000507476 OLFML2BQ68BL8 750 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 TMC6Q7Z403 805 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 IGDCC3Q8IVU1 814 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 DSCC1Q9BVC3 393 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 KRTAP9-3Q9BYQ3 159 aa8.1□□□□□ -1.11
LINC01088-203ENST00000507476 NUDT19A8MXV4 375 aa8.09□□□□□ -1.11
LINC01088-203ENST00000507476 ZNF76P36508 570 aa8.09□□□□□ -1.11
LINC01088-203ENST00000507476 DCAF15Q66K64 600 aa8.09□□□□□ -1.11
LINC01088-203ENST00000507476 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
LINC01088-203ENST00000507476 RELTQ969Z4 430 aa8.09□□□□□ -1.11
LINC01088-203ENST00000507476 H0Y8X5 98 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 MSL3P1P0C860 447 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 CBX2Q14781 532 aaPredicted RBP8.08□□□□□ -1.12
LINC01088-203ENST00000507476 ZYXQ15942 572 aaKnown RBP8.08□□□□□ -1.12
LINC01088-203ENST00000507476 ZNF394Q53GI3 561 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 AXDND1Q5T1B0 1012 aaPredicted RBP8.08□□□□□ -1.12
LINC01088-203ENST00000507476 RPTNQ6XPR3 784 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 USP48Q86UV5 1035 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 BACH2Q9BYV9 841 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 BCL11AQ9H165 835 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 XYLT2Q9H1B5 865 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 PCDHGB7Q9Y5F8 929 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 PCDHA5Q9Y5H7 936 aa8.08□□□□□ -1.12
LINC01088-203ENST00000507476 GSTM1P09488 218 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 IMPDH2P12268 514 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 ZNF445P59923 1031 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 FANCCQ00597 558 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 MVKQ03426 396 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 VMACQ2NL98 169 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 ANKRD39Q53RE8 183 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 TM9SF2Q99805 663 aa8.07□□□□□ -1.12
LINC01088-203ENST00000507476 SRRTQ9BXP5 876 aaKnown RBP8.07□□□□□ -1.12
LINC01088-203ENST00000507476 CNKSR3Q6P9H4 555 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 RUFY4Q6ZNE9 571 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
LINC01088-203ENST00000507476 BRF1Q92994 677 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 GP6Q9HCN6 339 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 PPT2Q9UMR5 302 aa8.06□□□□□ -1.12
LINC01088-203ENST00000507476 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
LINC01088-203ENST00000507476 NCKAP1LP55160 1127 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 TMEM62Q0P6H9 643 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
LINC01088-203ENST00000507476 CWF19L1Q69YN2 538 aaKnown RBP8.05□□□□□ -1.12
LINC01088-203ENST00000507476 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 NAT16Q8N8M0 369 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 RBBP8NLQ8NC74 664 aaPredicted RBP8.05□□□□□ -1.12
LINC01088-203ENST00000507476 FAM86C1Q9NVL1 165 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 RTEL1Q9NZ71 1219 aa8.05□□□□□ -1.12
LINC01088-203ENST00000507476 OTOL1A6NHN0 477 aaPredicted RBP8.04□□□□□ -1.12
LINC01088-203ENST00000507476 FGF10O15520 208 aaPredicted RBP8.04□□□□□ -1.12
LINC01088-203ENST00000507476 FOXD2O60548 495 aaPredicted RBP8.04□□□□□ -1.12
LINC01088-203ENST00000507476 TP53P04637 393 aaPredicted RBP8.04□□□□□ -1.12
LINC01088-203ENST00000507476 HLA-DQA1Q5Y7H0 255 aa8.04□□□□□ -1.12
LINC01088-203ENST00000507476 METTL5Q9NRN9 209 aaKnown RBP8.04□□□□□ -1.12
LINC01088-203ENST00000507476 ZNF451Q9Y4E5 1061 aa8.04□□□□□ -1.12
LINC01088-203ENST00000507476 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
LINC01088-203ENST00000507476 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 BUB1BO60566 1050 aaPredicted RBP8.03□□□□□ -1.12
LINC01088-203ENST00000507476 CD247P20963 164 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 GUCY2CP25092 1073 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 MAPKAPK2P49137 400 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 RACK1P63244 317 aaKnown RBP8.03□□□□□ -1.12
LINC01088-203ENST00000507476 NFIXQ14938 502 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 NOL9Q5SY16 702 aaKnown RBP8.03□□□□□ -1.12
LINC01088-203ENST00000507476 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 FIBCD1Q8N539 461 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 FEZF2Q8TBJ5 459 aa8.03□□□□□ -1.12
LINC01088-203ENST00000507476 FCRL3Q96P31 734 aaPredicted RBP8.03□□□□□ -1.12
LINC01088-203ENST00000507476 SASH1O94885 1247 aa8.02□□□□□ -1.13
LINC01088-203ENST00000507476 IGFBP6P24592 240 aaPredicted RBP8.02□□□□□ -1.13
LINC01088-203ENST00000507476 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
LINC01088-203ENST00000507476 PWWP2AQ96N64 755 aa8.02□□□□□ -1.13
LINC01088-203ENST00000507476 ZNF214Q9UL59 606 aaPredicted RBP8.02□□□□□ -1.13
LINC01088-203ENST00000507476 HCFC2Q9Y5Z7 792 aa8.02□□□□□ -1.13
LINC01088-203ENST00000507476 CBFA2T2O43439 604 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms