RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 RASA1P20936 1047 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 TDO2P48775 406 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 KIAA1755Q5JYT7 1200 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 TRIB2Q92519 343 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 TANGO6Q9C0B7 1094 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 SPATC1LQ9H0A9 340 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 MROH8Q9H579 483 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 TMEM134Q9H6X4 195 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 CWC22Q9HCG8 908 aaKnown RBP9.52□□□□□ -0.89
SCN1A-207ENST00000507401 GOPCQ9HD26 462 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 IVNS1ABPQ9Y6Y0 642 aa9.52□□□□□ -0.89
SCN1A-207ENST00000507401 RLFQ13129 1914 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 RCCD1A6NED2 376 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 FLOT1O75955 427 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 SLC25A27O95847 323 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 ZKSCAN1P17029 563 aaPredicted RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 DNAJB2P25686 324 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 KCNC4Q03721 635 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 PDE4BQ07343 736 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 GRB14Q14449 540 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 BECN1Q14457 450 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 CENPQQ7L2Z9 268 aaPredicted RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 ABRAQ8N0Z2 381 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 SPICE1Q8N0Z3 855 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 NEDD1Q8NHV4 660 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 DPF3Q92784 378 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 APBA2Q99767 749 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 MOV10L1Q9BXT6 1211 aaKnown RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 NAPBQ9H115 298 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 OSBPL3Q9H4L5 887 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 EPB41L4AQ9HCS5 686 aaPredicted RBP9.51□□□□□ -0.89
SCN1A-207ENST00000507401 OGDHLQ9ULD0 1010 aa9.51□□□□□ -0.89
SCN1A-207ENST00000507401 IGKV6D-41A0A0C4DH26 115 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 F5H6K3 240 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 IGHA2P01877 340 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 ATP2B2Q01814 1243 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 KLRC3Q07444 240 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 CACNB2Q08289 660 aaPredicted RBP9.5□□□□□ -0.89
SCN1A-207ENST00000507401 TRIM32Q13049 653 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 ALX1Q15699 326 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 MFSD14CQ5VZR4 134 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 NECAB2Q7Z6G3 386 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 DPP9Q86TI2 863 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 CLEC10AQ8IUN9 316 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 PRPF38AQ8NAV1 312 aaKnown RBP9.5□□□□□ -0.89
SCN1A-207ENST00000507401 SLC5A4Q9NY91 659 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 MTMR4Q9NYA4 1195 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 ANAPC4Q9UJX5 808 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 NR2E3Q9Y5X4 410 aa9.5□□□□□ -0.89
SCN1A-207ENST00000507401 GREB1LQ9C091 1923 aaPredicted RBP9.5□□□□□ -0.89
SCN1A-207ENST00000507401 VWA5AO00534 786 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 RNF40O75150 1001 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 RGS20O76081 388 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 TTLL1O95922 423 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 IGHDP01880 384 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
SCN1A-207ENST00000507401 ERCC3P19447 782 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 CLCN1P35523 988 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 COPB2P35606 906 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 NUCB1Q02818 461 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 PPARAQ07869 468 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
SCN1A-207ENST00000507401 TMEM132BQ14DG7 1078 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 MCMDC2Q4G0Z9 681 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 OLFML2BQ68BL8 750 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 CHD1LQ86WJ1 897 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 RIOX2Q8IUF8 465 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 ATG4CQ96DT6 458 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 PAWRQ96IZ0 340 aaKnown RBP9.49□□□□□ -0.89
SCN1A-207ENST00000507401 CLIP2Q9UDT6 1046 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 PPP1R9AQ9ULJ8 1098 aa9.49□□□□□ -0.89
SCN1A-207ENST00000507401 H0YGN5 161 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 ATP2A1O14983 1001 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 MSCO60682 206 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 PRDM1O75626 825 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 NDUFB10O96000 172 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 FGRP09769 529 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 TSPY3P0CV98 308 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 TSPY8P0CW00 308 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 FDX1P10109 184 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 FCER1AP12319 257 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 ADORA2AP29274 412 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 STAT3P40763 770 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 TFAP4Q01664 338 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 CCL14Q16627 93 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 FAM83BQ5T0W9 1011 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 GMCL1P1Q8NEA9 526 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 EXOC6Q8TAG9 804 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 CEP95Q96GE4 821 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 MTRQ99707 1265 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 LNPKQ9C0E8 428 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 DIS3Q9Y2L1 958 aaKnown RBP9.48□□□□□ -0.89
SCN1A-207ENST00000507401 CEP290O15078 2479 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
SCN1A-207ENST00000507401 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms