RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 FANCGO15287 622 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
PFDN1-202ENST00000507185 BNIP3Q12983 259 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 ZNF574Q6ZN55 896 aaPredicted RBP10.4□□□□□ -0.74
PFDN1-202ENST00000507185 SV2BQ7L1I2 683 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 CDC37L1Q7L3B6 337 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 NPAS4Q8IUM7 802 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 ELMO3Q96BJ8 720 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 MKNK2Q9HBH9 465 aa10.4□□□□□ -0.74
PFDN1-202ENST00000507185 AKAP12Q02952 1782 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 NFAT5O94916 1531 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 QRICH2Q9H0J4 1663 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 FGD1P98174 961 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 RING1Q06587 406 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 COL19A1Q14993 1142 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 PLCL1Q15111 1095 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 SPRED2Q7Z698 418 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 COL23A1Q86Y22 540 aaPredicted RBP10.39□□□□□ -0.75
PFDN1-202ENST00000507185 KRTAP4-12Q9BQ66 201 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 SBF2Q86WG5 1849 aa10.39□□□□□ -0.75
PFDN1-202ENST00000507185 NHSQ6T4R5 1651 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 HSPA6P17066 643 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 NTF4P34130 210 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 AMPHP49418 695 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 OXCT1P55809 520 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 IFI16Q16666 785 aaKnown RBP10.38□□□□□ -0.75
PFDN1-202ENST00000507185 ZBTB37Q5TC79 503 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 KCT2Q8NC54 265 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 GOLGA2P5Q9HBQ8 144 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 PRDM10Q9NQV6 1147 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 VAV3Q9UKW4 847 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 USP47Q96K76 1375 aa10.38□□□□□ -0.75
PFDN1-202ENST00000507185 TRPM1Q7Z4N2 1603 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 COL18A1P39060 1754 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 CEACAM5P06731 702 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 PRKCQQ04759 706 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 ZCRB1Q8TBF4 217 aaKnown RBP10.37□□□□□ -0.75
PFDN1-202ENST00000507185 GTF2IRD1Q9UHL9 959 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 U3KQE9 123 aa10.37□□□□□ -0.75
PFDN1-202ENST00000507185 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 WNK3Q9BYP7 1800 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 EAPPQ56P03 285 aaPredicted RBP10.36□□□□□ -0.75
PFDN1-202ENST00000507185 UBE3DQ7Z6J8 389 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 USHBP1Q8N6Y0 703 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 ANKRD36BQ8N2N9 1353 aa10.36□□□□□ -0.75
PFDN1-202ENST00000507185 TMEM265A0A087WTH1 108 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 TCF3P15923 654 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 ITIH2P19823 946 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 INPP5AQ14642 412 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 AOC3Q16853 763 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 TTBK2Q6IQ55 1244 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 HDXQ7Z353 690 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 ZNF507Q8TCN5 953 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 IP6K1Q92551 441 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 HRASLS5Q96KN8 279 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 HEXIM2Q96MH2 286 aaKnown RBP10.35□□□□□ -0.75
PFDN1-202ENST00000507185 SIN3AQ96ST3 1273 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
PFDN1-202ENST00000507185 AK5Q9Y6K8 562 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 USP31Q70CQ4 1352 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 KIAA1210Q9ULL0 1709 aa10.35□□□□□ -0.75
PFDN1-202ENST00000507185 SHANK3Q9BYB0 1731 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 PRAMEF27A3QJZ7 478 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 CD8BP10966 210 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 LMNB1P20700 586 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 FBLN1P23142 703 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 PTPN11Q06124 597 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-202ENST00000507185 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
PFDN1-202ENST00000507185 LRFN4Q6PJG9 635 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 WFDC3Q8IUB2 231 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 RAPGEF4Q8WZA2 1011 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 COG3Q96JB2 828 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 CARD11Q9BXL7 1154 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 PLAGL2Q9UPG8 496 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 CD2APQ9Y5K6 639 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 SBNO2Q9Y2G9 1366 aa10.34□□□□□ -0.75
PFDN1-202ENST00000507185 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 JUNBP17275 347 aaPredicted RBP10.33□□□□□ -0.76
PFDN1-202ENST00000507185 ZNF792Q3KQV3 632 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 SMIM5Q71RC9 77 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 ASIC4Q96FT7 647 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 PLPPR2Q96GM1 343 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 BTAF1O14981 1849 aa10.33□□□□□ -0.76
PFDN1-202ENST00000507185 NSD2O96028 1365 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 IGF2BP3O00425 579 aaKnown RBP eCLIP10.32□□□□□ -0.76
PFDN1-202ENST00000507185 ITGB5P18084 799 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 HOXC9P31274 260 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 CD96P40200 585 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 TAGLNQ01995 201 aaKnown RBP10.32□□□□□ -0.76
PFDN1-202ENST00000507185 ARMCX6Q7L4S7 300 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 FAM214BQ7L5A3 538 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 FLAD1Q8NFF5 587 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 EDC4Q6P2E9 1401 aaKnown RBP10.32□□□□□ -0.76
PFDN1-202ENST00000507185 MAP3K19Q56UN5 1328 aa10.32□□□□□ -0.76
PFDN1-202ENST00000507185 RGPD5Q99666 1765 aa10.31□□□□□ -0.76
PFDN1-202ENST00000507185 GOLGB1Q14789 3259 aaKnown RBP10.31□□□□□ -0.76
PFDN1-202ENST00000507185 A0A1W2PP64 1363 aa10.31□□□□□ -0.76
PFDN1-202ENST00000507185 PALLDQ8WX93 1383 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms