RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 HPS5Q9UPZ3 1129 aa11.33□□□□□ -0.6
SFXN1-205ENST00000506963 BAZ2BQ9UIF8 2168 aaKnown RBP11.33□□□□□ -0.6
SFXN1-205ENST00000506963 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 SMCHD1A6NHR9 2005 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 KLF18A0A0U1RQI7 1052 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 TNPO2O14787 897 aaKnown RBP11.32□□□□□ -0.6
SFXN1-205ENST00000506963 CYTH3O43739 400 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 ERCC3P19447 782 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 HOXD10P28358 340 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 FGD1P98174 961 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 IRF5Q13568 498 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 TMTC3Q6ZXV5 915 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 GPR142Q7Z601 462 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 PLEKHH3Q7Z736 793 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 CHST13Q8NET6 341 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 NUP133Q8WUM0 1156 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 USP6NLQ92738 828 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 ZNF274Q96GC6 653 aaPredicted RBP11.32□□□□□ -0.6
SFXN1-205ENST00000506963 MYL10Q9BUA6 226 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 UBA5Q9GZZ9 404 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 FAM217BQ9NTX9 383 aaPredicted RBP11.32□□□□□ -0.6
SFXN1-205ENST00000506963 SRRDQ9UH36 339 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 GJD2Q9UKL4 321 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 ISY1Q9ULR0 285 aaKnown RBP11.32□□□□□ -0.6
SFXN1-205ENST00000506963 MYH6P13533 1939 aa11.32□□□□□ -0.6
SFXN1-205ENST00000506963 CCDC196A0A1B0GTZ2 297 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 SLC15A5A6NIM6 579 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 PTPREP23469 700 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 PDIA3P30101 505 aaKnown RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 APOBRQ0VD83 1088 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 FUT2Q10981 343 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 GRB14Q14449 540 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 MORN1Q5T089 497 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 SNRNP48Q6IEG0 339 aaKnown RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 NBPF11Q86T75 865 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 SOCS4Q8WXH5 440 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 COA7Q96BR5 231 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 CHMP4CQ96CF2 233 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 CPVLQ9H3G5 476 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 RAVER2Q9HCJ3 691 aaKnown RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 RIPK3Q9Y572 518 aa11.31□□□□□ -0.6
SFXN1-205ENST00000506963 CTDP1Q9Y5B0 961 aaPredicted RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 ZNFX1Q9P2E3 1918 aaKnown RBP11.31□□□□□ -0.6
SFXN1-205ENST00000506963 GOLGA8BA8MQT2 603 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 ZBTB5O15062 677 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 HOXC6P09630 235 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 XRCC5P13010 732 aaKnown RBP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 RXRAP19793 462 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 METAP2P50579 478 aaKnown RBP eCLIP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 NEK4P51957 841 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 AK2P54819 239 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 TRAF1Q13077 416 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 PLS1Q14651 629 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 RABEP1Q15276 862 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 CDC37Q16543 378 aaPredicted RBP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 RTN1Q16799 776 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 QRICH1Q2TAL8 776 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 SAMD1Q6SPF0 538 aaPredicted RBP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 CPXCR1Q8N123 301 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
SFXN1-205ENST00000506963 AGBL1Q96MI9 1066 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 PTPN22Q9Y2R2 807 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 TRIM17Q9Y577 477 aa11.3□□□□□ -0.6
SFXN1-205ENST00000506963 PNMA6FA0A0J9YX94 578 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 GOLGA8AA7E2F4 631 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 PLEKHA8P1O95397 391 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 IGHA2P01877 340 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 CDC27P30260 824 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 GHRHRQ02643 423 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 PRKCZQ05513 592 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 CCDC174Q6PII3 467 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 FBXO46Q6PJ61 603 aaPredicted RBP11.29□□□□□ -0.6
SFXN1-205ENST00000506963 RGS22Q8NE09 1264 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 AMNQ9BXJ7 453 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 ACAD9Q9H845 621 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 RNF146Q9NTX7 359 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 CCPG1Q9ULG6 757 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 IVNS1ABPQ9Y6Y0 642 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 ABCB11O95342 1321 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
SFXN1-205ENST00000506963 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 DHX16O60231 1041 aaKnown RBP11.28□□□□□ -0.6
SFXN1-205ENST00000506963 PFKFB2O60825 505 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 PPP1R11O60927 126 aaPredicted RBP11.28□□□□□ -0.6
SFXN1-205ENST00000506963 FCER1AP12319 257 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 RGS2P41220 211 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 FLT3LGP49771 235 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 SNAP25P60880 206 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 KCTD2Q14681 263 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 NTRK3Q16288 839 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms