RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 MAD2L2Q9UI95 211 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 PRR12Q9ULL5 1215 aa9.83□□□□□ -0.84
PDGFC-205ENST00000506880 ABCB11O95342 1321 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 PNMA6FA0A0J9YX94 578 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 ZBTB5O15062 677 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 FOXN1O15353 648 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 RTN1Q16799 776 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 Q6ZUG5 572 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 CTU1Q7Z7A3 348 aaKnown RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 CCDC84Q86UT8 332 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 ZNF296Q8WUU4 475 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 RRP36Q96EU6 259 aaKnown RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 ZKSCAN3Q9BRR0 538 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 AMNQ9BXJ7 453 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 RNF26Q9BY78 433 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 EFCC1Q9HA90 598 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 SEC63Q9UGP8 760 aaKnown RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 MRPL11Q9Y3B7 192 aaKnown RBP9.82□□□□□ -0.84
PDGFC-205ENST00000506880 PLXNB2O15031 1838 aa9.82□□□□□ -0.84
PDGFC-205ENST00000506880 CYP2C8P10632 490 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 FCER1AP12319 257 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 IFNAR1P17181 557 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 METAP2P50579 478 aaKnown RBP eCLIP9.81□□□□□ -0.84
PDGFC-205ENST00000506880 GRB14Q14449 540 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 GALNT17Q6IS24 598 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 TMTC3Q6ZXV5 915 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 PLEKHH3Q7Z736 793 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 CLEC10AQ8IUN9 316 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 TRIM22Q8IYM9 498 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 ANKRD13CQ8N6S4 541 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 WASF1Q92558 559 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 BRF1Q92994 677 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 ATG4CQ96DT6 458 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 LLPHQ9BRT6 129 aaKnown RBP9.81□□□□□ -0.84
PDGFC-205ENST00000506880 ACAD9Q9H845 621 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 SH3GLB2Q9NR46 395 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 SRRDQ9UH36 339 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 KIF3AQ9Y496 699 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 TAF6LQ9Y6J9 622 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 PLXNA1Q9UIW2 1896 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 STK36Q9NRP7 1315 aa9.81□□□□□ -0.84
PDGFC-205ENST00000506880 KLF18A0A0U1RQI7 1052 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 TNPO2O14787 897 aaKnown RBP9.8□□□□□ -0.84
PDGFC-205ENST00000506880 RAD21O60216 631 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 PFKFB2O60825 505 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 CNMDO75829 334 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 TBC1D8O95759 1140 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 XBP1P17861 261 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 PTPREP23469 700 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 RGS2P41220 211 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 PSMC4P43686 418 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 NEK4P51957 841 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 KCTD2Q14681 263 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 OLFML2BQ68BL8 750 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
PDGFC-205ENST00000506880 KCTD1Q719H9 257 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 NBPF11Q86T75 865 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 FBXO11Q86XK2 927 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 ADGRF4Q8IZF3 695 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 DNERQ8NFT8 737 aa9.8□□□□□ -0.84
PDGFC-205ENST00000506880 MOV10L1Q9BXT6 1211 aaKnown RBP9.8□□□□□ -0.84
PDGFC-205ENST00000506880 ADD3Q9UEY8 706 aaKnown RBP9.8□□□□□ -0.84
PDGFC-205ENST00000506880 ESYT2A0FGR8 921 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 GOLGA8AA7E2F4 631 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 GOLGA8BA8MQT2 603 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 CPLX1O14810 134 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 PRPF3O43395 683 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 PDIA3P30101 505 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 HMGN5P82970 282 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 AKAP17AQ02040 695 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 MAP2K5Q13163 448 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 TOB2Q14106 344 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 MORN1Q5T089 497 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 SNRNP48Q6IEG0 339 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 XRRA1Q6P2D8 792 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 GPR142Q7Z601 462 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 MICU3Q86XE3 530 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 CCDC148Q8NFR7 591 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 BICD2Q8TD16 824 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 USP6NLQ92738 828 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 APBA2Q99767 749 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 SLKQ9H2G2 1235 aaPredicted RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 JMJD4Q9H9V9 463 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 CWC22Q9HCG8 908 aaKnown RBP9.79□□□□□ -0.84
PDGFC-205ENST00000506880 TXNRD2Q9NNW7 524 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 FOXD4L1Q9NU39 408 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 BTBD7Q9P203 1132 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 CPA4Q9UI42 421 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 CCPG1Q9ULG6 757 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 ZNF536O15090 1300 aa9.79□□□□□ -0.84
PDGFC-205ENST00000506880 DNAJC25-GNG10A0A024R161 153 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms