RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 CTDP1Q9Y5B0 961 aaPredicted RBP13.47□□□□□ -0.25
CCHCR1-220ENST00000506831 PRUNE2Q8WUY3 3088 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 PATL2C9JE40 543 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 TTLL1O95922 423 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 TIMP1P01033 207 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 CDK7P50613 346 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 EPHB4P54760 987 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 GJA9P57773 515 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 NKX3-2P78367 333 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 CPXCR1Q8N123 301 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 ANKRD35Q8N283 1001 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 SPC25Q9HBM1 224 aa13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
CCHCR1-220ENST00000506831 PLIN4Q96Q06 1357 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 MCM3APO60318 1980 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 TDO2P48775 406 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 NEDD1Q8NHV4 660 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 MYLIPQ8WY64 445 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 KIFC2Q96AC6 838 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 CEP95Q96GE4 821 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 NACAP1Q9BZK3 213 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 RAVER2Q9HCJ3 691 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 EPB41L4AQ9HCS5 686 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 MYO9BQ13459 2157 aa13.45□□□□□ -0.26
CCHCR1-220ENST00000506831 ARVCFO00192 962 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 PLA2G6O60733 806 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 APPP05067 770 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 ASGR1P07306 291 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 SLC3A2P08195 630 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 C6orf222P0C671 652 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 BMP3P12645 472 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 FOSL2P15408 326 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 PDE4BQ07343 736 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 PPIGQ13427 754 aaKnown RBP eCLIP13.44□□□□□ -0.262e-6■□□□□ 11.2
CCHCR1-220ENST00000506831 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 MFSD5Q6N075 450 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 ARMCX2Q7L311 632 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 IFNL3Q8IZI9 196 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 STK11IPQ8N1F8 1099 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 CHURC1Q8WUH1 139 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 FGD4Q96M96 766 aa13.44□□□□□ -0.26
CCHCR1-220ENST00000506831 TTC41PQ6P2S7 1318 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 MYADML2A6NDP7 307 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 PRDM1O75626 825 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 TSPY3P0CV98 308 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 TSPY8P0CW00 308 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 TKFCQ3LXA3 575 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 GNASQ5JWF2 1037 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 SLFN13Q68D06 897 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 FAM160B2Q86V87 743 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 FAM133AQ8N9E0 248 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 GMCL1Q96IK5 515 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 SEZ6LQ9BYH1 1024 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 KATNBL1Q9H079 304 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 ACAD9Q9H845 621 aa13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 SPTBN5Q9NRC6 3674 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-220ENST00000506831 ASB14A6NK59 587 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 M0R2C6 588 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 ERC2O15083 957 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 ADCY6O43306 1168 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 CABYRO75952 493 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 DNAJB2P25686 324 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 SLC4A3P48751 1232 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 STAT2P52630 851 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 RASIP1Q5U651 963 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 FAM126BQ8IXS8 530 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 STAG1Q8WVM7 1258 aa13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 SYMPKQ92797 1274 aaKnown RBP13.42□□□□□ -0.26
CCHCR1-220ENST00000506831 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.266e-7■□□□□ 9.6
CCHCR1-220ENST00000506831 TMEM232C9JQI7 657 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 CTAGE5O15320 804 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 TLR3O15455 904 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 PDE4AP27815 886 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 TFAP4Q01664 338 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 TMEM240Q5SV17 173 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 C16orf59Q7L2K0 433 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 LRRC47Q8N1G4 583 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 VTI1AQ96AJ9 217 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 NAPBQ9H115 298 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 ZNF576Q9H609 170 aa13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 A1CFQ9NQ94 594 aaKnown RBP13.41□□□□□ -0.26
CCHCR1-220ENST00000506831 ZNF536O15090 1300 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 CD4P01730 458 aa13.4□□□□□ -0.26
CCHCR1-220ENST00000506831 SLC1A4P43007 532 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms