RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 RNF4P78317 190 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 FAM160A1Q05DH4 1040 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 NMIQ13287 307 aaPredicted RBP4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 PWP1Q13610 501 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 FHL2Q14192 279 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 CSRP2Q16527 193 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 TMC6Q7Z403 805 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 TMC4Q7Z404 712 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 RHOVQ96L33 236 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 TMEM74Q96NL1 305 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 KIF2CQ99661 725 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 ZMYM5Q9UJ78 669 aa4.69□□□□□ -1.66
TOPBP1-205ENST00000506779 SORBS3O60504 671 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 USP2O75604 605 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 CTSHP09668 335 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 IGFBP6P24592 240 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 ITGAEP38570 1179 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 SLC14A2Q15849 920 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 CCDC27Q2M243 656 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 TMCO4Q5TGY1 634 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 RNF111Q6ZNA4 994 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 WAPLQ7Z5K2 1190 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 GOLM1Q8NBJ4 401 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 G6PC3Q9BUM1 346 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 POLR3KQ9Y2Y1 108 aaPredicted RBP4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 PRR36Q9H6K5 1346 aa4.68□□□□□ -1.66
TOPBP1-205ENST00000506779 MINDY4BA8MYZ0 360 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 PLATP00750 562 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 RAG1P15918 1043 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 PNLIPP16233 465 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 GJA9P57773 515 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 ERVFRD-1P60508 538 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 MPP2Q14168 576 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 TBC1D10BQ4KMP7 808 aaPredicted RBP4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 REC114Q7Z4M0 266 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 ENOX1Q8TC92 643 aaKnown RBP4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 FNIP1Q8TF40 1166 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 FOXP3Q9BZS1 431 aa4.67□□□□□ -1.66
TOPBP1-205ENST00000506779 TLR3O15455 904 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 NRDCO43847 1150 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 DNAJA2O60884 412 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 FKTNO75072 461 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 MFAP1P55081 439 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 PCBP3P57721 371 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 CWF19L2Q2TBE0 894 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 ARSHQ5FYA8 562 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 CEP128Q6ZU80 1094 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 SYTL5Q8TDW5 730 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 ZNF526Q8TF50 670 aaPredicted RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 CHFRQ96EP1 664 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 RSRP1Q9BUV0 290 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 HDAC8Q9BY41 377 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 TCFL5Q9UL49 500 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 ZNF281Q9Y2X9 895 aa4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 WDR33Q9C0J8 1336 aaKnown RBP4.66□□□□□ -1.66
TOPBP1-205ENST00000506779 SH3D21A4FU49 640 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 PLA2G1BP04054 148 aaKnown RBP4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 MPOP05164 745 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 KIR2DL1P43626 348 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 KIR2DL2P43627 348 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 FAM196AQ6ZSG2 479 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 SAPCD2Q86UD0 394 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 DAGLBQ8NCG7 672 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 FBXO27Q8NI29 283 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 TCTN2Q96GX1 697 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 MAP6Q96JE9 813 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 SSBP3Q9BWW4 388 aaPredicted RBP4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 PRDM14Q9GZV8 571 aa4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.65□□□□□ -1.67
TOPBP1-205ENST00000506779 RGS13O14921 159 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 SYPP08247 313 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 MSL3P1P0C860 447 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 TMC3Q7Z5M5 1100 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 FBXO33Q7Z6M2 555 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 GMIPQ9P107 970 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 PCDHB14Q9Y5E9 798 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 IRS2Q9Y4H2 1338 aa4.64□□□□□ -1.67
TOPBP1-205ENST00000506779 UBOX5O94941 541 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 RAD51AP2Q09MP3 1159 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 TMEM62Q0P6H9 643 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 OVOS1Q6IE37 1185 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 USHBP1Q8N6Y0 703 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 ZNF655Q8N720 491 aaPredicted RBP4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 KBTBD4Q9NVX7 518 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 PODXL2Q9NZ53 605 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 SUPT16HQ9Y5B9 1047 aaKnown RBP4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 TAF6LQ9Y6J9 622 aa4.63□□□□□ -1.67
TOPBP1-205ENST00000506779 CLEC3AO75596 197 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 PRAMEF1O95521 474 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 PFKLP17858 780 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 POLR2BP30876 1174 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 RTP1P59025 263 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 SNW1Q13573 536 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 RAB3GAP1Q15042 981 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 NBPF9Q3BBW0 867 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 BBS9Q3SYG4 887 aa4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 NBPF12Q5TAG4 269 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-205ENST00000506779 SCUBE1Q8IWY4 988 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms