RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 TNKSO95271 1327 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 E7EWF7 191 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 CNGA1P29973 690 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 TMEM132BQ14DG7 1078 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 ZNF697Q5TEC3 545 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 RCSD1Q6JBY9 416 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 NCAPG2Q86XI2 1143 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 DCAF4Q8WV16 495 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 FAM161BQ96MY7 647 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 TTC14Q96N46 770 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 GUCD1Q96NT3 240 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 ZSCAN10Q96SZ4 725 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-209ENST00000506630 UBAC1Q9BSL1 405 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 ZSWIM5Q9P217 1185 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 ADAMTS5Q9UNA0 930 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 TAF6LQ9Y6J9 622 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
TCOF1-209ENST00000506630 FRMPD2Q68DX3 1309 aaPredicted RBP15.39■□□□□ 0.05
TCOF1-209ENST00000506630 MCM3APO60318 1980 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 FRMPD3Q5JV73 1810 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 ZBED4O75132 1171 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 ERCC3P19447 782 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 STOX1Q6ZVD7 989 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 CYB5R4Q7L1T6 521 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 FAM160B2Q86V87 743 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 DGKHQ86XP1 1220 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 ENAHQ8N8S7 591 aaPredicted RBP15.38■□□□□ 0.05
TCOF1-209ENST00000506630 SHCBP1Q8NEM2 672 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 NCOA7Q8NI08 942 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 NPLOC4Q8TAT6 608 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 KAT14Q9H8E8 782 aa15.38■□□□□ 0.05
TCOF1-209ENST00000506630 DDX20Q9UHI6 824 aaKnown RBP15.38■□□□□ 0.05
TCOF1-209ENST00000506630 SLC15A5A6NIM6 579 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 PTPREP23469 700 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 STAT3P40763 770 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 SLC4A3P48751 1232 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 ATN1P54259 1190 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-209ENST00000506630 IFIT1BQ5T764 474 aaKnown RBP15.37■□□□□ 0.05
TCOF1-209ENST00000506630 CREB3L3Q68CJ9 461 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 PNMA1Q8ND90 353 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 REPS2Q8NFH8 660 aa15.37■□□□□ 0.05
TCOF1-209ENST00000506630 ZNF214Q9UL59 606 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-209ENST00000506630 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
TCOF1-209ENST00000506630 DNM1LO00429 736 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 SLC27A2O14975 620 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 SLC25A27O95847 323 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 PDHBP11177 359 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 GRB14Q14449 540 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 SNRNP48Q6IEG0 339 aaKnown RBP15.36■□□□□ 0.05
TCOF1-209ENST00000506630 RIOX2Q8IUF8 465 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 TEX13BQ9BXU2 312 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 MROH8Q9H579 483 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 SLC38A10Q9HBR0 1119 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
TCOF1-209ENST00000506630 ERICH2A1L162 156 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 IFIT3O14879 490 aaKnown RBP15.35■□□□□ 0.05
TCOF1-209ENST00000506630 PLA2G6O60733 806 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 HOXC6P09630 235 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 COPB2P35606 906 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 RTP1P59025 263 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 TTBK2Q6IQ55 1244 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 CHST3Q7LGC8 479 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 ARRDC4Q8NCT1 418 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 RAVER2Q9HCJ3 691 aaKnown RBP15.35■□□□□ 0.05
TCOF1-209ENST00000506630 PRR12Q9ULL5 1215 aa15.35■□□□□ 0.05
TCOF1-209ENST00000506630 IGHA2P01877 340 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 FDX1P10109 184 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 ADORA2AP29274 412 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 SLC16A2P36021 539 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 SNAP25P60880 206 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 WTAPQ15007 396 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 SART3Q15020 963 aaKnown RBP15.34■□□□□ 0.05
TCOF1-209ENST00000506630 NECTIN1Q15223 517 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 RNF20Q5VTR2 975 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 DPP9Q86TI2 863 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 MB21D2Q8IYB1 491 aaPredicted RBP15.34■□□□□ 0.05
TCOF1-209ENST00000506630 TRPV1Q8NER1 839 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 MMP19Q99542 508 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 ATP11BQ9Y2G3 1177 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 LCTP09848 1927 aa15.34■□□□□ 0.05
TCOF1-209ENST00000506630 STRNO43815 780 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 COBLO75128 1261 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 SNHG28P0DPA3 235 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 FCER1AP12319 257 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 CYP2C19P33261 490 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 OAZ1P54368 228 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 ZNF543Q08ER8 600 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 KCTD2Q14681 263 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 SEC23AQ15436 765 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
TCOF1-209ENST00000506630 SYDE2Q5VT97 1194 aa15.33■□□□□ 0.04
TCOF1-209ENST00000506630 CDX2Q99626 313 aaPredicted RBP15.33■□□□□ 0.04
TCOF1-209ENST00000506630 KBTBD13C9JR72 458 aa15.32■□□□□ 0.04
TCOF1-209ENST00000506630 ATP2A1O14983 1001 aa15.32■□□□□ 0.04
TCOF1-209ENST00000506630 ANTXR2P58335 489 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms