RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 KCNH3Q9ULD8 1083 aa4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 TPX2Q9ULW0 747 aaKnown RBP4.42□□□□□ -1.7
TRAPPC11-205ENST00000506426 FAM95CA0A1B0GW59 222 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 LRRN2O75325 713 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 PARNO95453 639 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 CPP00450 1065 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 SNRPB2P08579 225 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 C6orf222P0C671 652 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 BMP3P12645 472 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 ITIH2P19823 946 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 POU3F3P20264 500 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAP4P27816 1152 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 PMLP29590 882 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 IREB2P48200 963 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 CDKN1CP49918 316 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 EVA1CP58658 441 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 AMPD2Q01433 879 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 EXOSC10Q01780 885 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 ADGRE1Q14246 886 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 SGO2Q562F6 1265 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 CCDC181Q5TID7 509 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 PAOXQ6QHF9 649 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 MAMDC2Q7Z304 686 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 TOP6BLQ8N6T0 577 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 ATL2Q8NHH9 583 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 SLC7A14Q8TBB6 771 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 UTP4Q969X6 686 aaKnown RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 TP53INP1Q96A56 240 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 UBL7Q96S82 380 aaPredicted RBP4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 NKX2-4Q9H2Z4 354 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 TRIM39Q9HCM9 518 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 CYP26B1Q9NR63 512 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 GFOD1Q9NXC2 390 aa4.41□□□□□ -1.7
TRAPPC11-205ENST00000506426 DYNC1LI2O43237 492 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SIGLEC6O43699 453 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 OPA1O60313 960 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 VAMP4O75379 141 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 DNAJC8O75937 253 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 NPTXRO95502 500 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 EOMESO95936 686 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 ASLP04424 464 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SCG5P05408 212 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 H2AFB1P0C5Y9 115 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 H2AFB2P0C5Z0 115 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 NOS3P29474 1203 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 FLT3P36888 993 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 NEK4P51957 841 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 GFRA1P56159 465 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 CDK5R2Q13319 367 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SNW1Q13573 536 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SF1Q15637 639 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 NFKBIBQ15653 356 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SFRP5Q5T4F7 317 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SEZ6L2Q6UXD5 910 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 BRAPQ7Z569 592 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 GSTCDQ8NEC7 633 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 LEO1Q8WVC0 666 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 MYRFLQ96LU7 910 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 MAGEB10Q96LZ2 347 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 ZDHHC15Q96MV8 337 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 SLC52A2Q9HAB3 445 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 CHST7Q9NS84 486 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 CHPF2Q9P2E5 772 aa4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 G3BP2Q9UN86 482 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 TNPO3Q9Y5L0 923 aaKnown RBP4.4□□□□□ -1.71
TRAPPC11-205ENST00000506426 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 BLACEA4D250 179 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 B4E1Z4 1266 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 CBX7O95931 251 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 NAT1P18440 290 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 POU3F2P20265 443 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 IGFALSP35858 605 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 ECI1P42126 302 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 KIR3DL1P43629 444 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 NOP2P46087 812 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 POU4F1Q01851 419 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 NMIQ13287 307 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 BRDTQ58F21 947 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 HSP90AB2PQ58FF8 381 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 ODR4Q5SWX8 454 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 CWF19L1Q69YN2 538 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 MCTP1Q6DN14 999 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 USP53Q70EK8 1073 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 UBE2R2Q712K3 238 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 TMC3Q7Z5M5 1100 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 FAM20CQ8IXL6 584 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 AFAP1L2Q8N4X5 818 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 TMEM145Q8NBT3 493 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 ENOX1Q8TC92 643 aaKnown RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 DCAF4Q8WV16 495 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 JDP2Q8WYK2 163 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 DUSP23Q9BVJ7 150 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 KCNF1Q9H3M0 494 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 PRDM5Q9NQX1 630 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 C1GALT1Q9NS00 363 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 RNF112Q9ULX5 631 aa4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 GPR55Q9Y2T6 319 aaPredicted RBP4.39□□□□□ -1.71
TRAPPC11-205ENST00000506426 AQP7O14520 342 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms