RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 PRR13Q9NZ81 148 aa7.99□□□□□ -1.13
DEPDC1B-203ENST00000505017 SRSF3P84103 164 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 RBBP8NLQ8NC74 664 aaPredicted RBP7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 JMJD8Q96S16 334 aa7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 CDADC1Q9BWV3 514 aa7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 KLHL14Q9P2G3 628 aa7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 CCDC88BA6NC98 1476 aa7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 LTBP3Q9NS15 1303 aa7.98□□□□□ -1.13
DEPDC1B-203ENST00000505017 H0Y8X5 98 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 HRKO00198 91 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 INHBBP09529 407 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 ZNF445P59923 1031 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 TMEM132EQ6IEE7 984 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 UNC5AQ6ZN44 842 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 LSRQ86X29 649 aaPredicted RBP7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 C20orf173Q96LM9 149 aa7.97□□□□□ -1.13
DEPDC1B-203ENST00000505017 MSL3P1P0C860 447 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 MFAP1P55081 439 aaKnown RBP7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 ANKRD39Q53RE8 183 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 LILRA6Q6PI73 481 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 CCDC144CPQ8IYA2 1237 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 BRF1Q92994 677 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 DHRS1Q96LJ7 313 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 TM9SF2Q99805 663 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 FAM86C1Q9NVL1 165 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 ACSL6Q9UKU0 697 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 CNOT6Q9ULM6 557 aaKnown RBP7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 ZNF451Q9Y4E5 1061 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 KCTD3Q9Y597 815 aa7.96□□□□□ -1.14
DEPDC1B-203ENST00000505017 TP53P04637 393 aaPredicted RBP7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 IMPDH2P12268 514 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 PRKCAP17252 672 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 CDR1P51861 262 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 GALNT18Q6P9A2 607 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 CCDC81Q6ZN84 652 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 RNF34Q969K3 372 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 FERD3LQ96RJ6 166 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 GP6Q9HCN6 339 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 TNFRSF12AQ9NP84 129 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 GINM1Q9NU53 330 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 CC2D2AQ9P2K1 1620 aa7.95□□□□□ -1.14
DEPDC1B-203ENST00000505017 A0A1W2PQ45 241 aaPredicted RBP7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 A0A1W2PQY0 241 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 WTIPA6NIX2 430 aaPredicted RBP7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 CBFA2T2O43439 604 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 GSNP06396 782 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 PI3P19957 117 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 GUCY2CP25092 1073 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 MVKQ03426 396 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 TMEFF1Q8IYR6 380 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 SRRTQ9BXP5 876 aaKnown RBP7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 KRTAP4-2Q9BYR5 136 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 IMPACTQ9P2X3 320 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 ZNF214Q9UL59 606 aaPredicted RBP7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 TAF6LQ9Y6J9 622 aa7.94□□□□□ -1.14
DEPDC1B-203ENST00000505017 IRS4O14654 1257 aaPredicted RBP7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 CD247P20963 164 aa7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 PAK2Q13177 524 aa7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 IGDCC3Q8IVU1 814 aa7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 DACT3Q96B18 629 aaPredicted RBP7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 FCRL3Q96P31 734 aaPredicted RBP7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 RAPGEFL1Q9UHV5 662 aa7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
DEPDC1B-203ENST00000505017 N4BP3O15049 544 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 TRIM13O60858 407 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 GSTM1P09488 218 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 HOXA5P20719 270 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 VAMP1P23763 118 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 FBXW10Q5XX13 1052 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 SIGLEC10Q96LC7 697 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 KCNC2Q96PR1 638 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 MCMBPQ9BTE3 642 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 DSCC1Q9BVC3 393 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 FHOD1Q9Y613 1164 aa7.92□□□□□ -1.14
DEPDC1B-203ENST00000505017 FGF10O15520 208 aaPredicted RBP7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 SOX9P48436 509 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 CYP4F8P98187 520 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 CBX2Q14781 532 aaPredicted RBP7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 RPTNQ6XPR3 784 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 FIBCD1Q8N539 461 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 NUP43Q8NFH3 380 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 SIRT5Q9NXA8 310 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 PCDHA5Q9Y5H7 936 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 HCFC2Q9Y5Z7 792 aa7.91□□□□□ -1.14
DEPDC1B-203ENST00000505017 NUDT19A8MXV4 375 aa7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 IFNGR1P15260 489 aa7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 LDHDQ86WU2 507 aa7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 MZB1Q8WU39 189 aa7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 SMARCC1Q92922 1105 aaPredicted RBP7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 PARD6AQ9NPB6 346 aa7.9□□□□□ -1.14
DEPDC1B-203ENST00000505017 A0A0G2JLL6 359 aaPredicted RBP7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 SCAMP3O14828 347 aaKnown RBP7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 MPOP05164 745 aa7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 BMP7P18075 431 aa7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 ENDOUP21128 410 aaKnown RBP7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 NCKAP1LP55160 1127 aa7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 LAPTM5Q13571 262 aa7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 ZNF385BQ569K4 471 aa7.89□□□□□ -1.15
DEPDC1B-203ENST00000505017 TMC6Q7Z403 805 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms