RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 M0R2N6 131 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
DDX41-203ENST00000504781 BMP15O95972 392 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 FDX1P10109 184 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 ZNF157P51786 506 aaPredicted RBP11.63□□□□□ -0.55
DDX41-203ENST00000504781 MRPL12P52815 198 aaKnown RBP11.63□□□□□ -0.55
DDX41-203ENST00000504781 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 SF3A1Q15459 793 aaKnown RBP11.63□□□□□ -0.55
DDX41-203ENST00000504781 NPY5RQ15761 445 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 SHROOM1Q2M3G4 852 aaPredicted RBP11.63□□□□□ -0.55
DDX41-203ENST00000504781 WWC2Q6AWC2 1192 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 HEATR3Q7Z4Q2 680 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 GPT2Q8TD30 523 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 PIBF1Q8WXW3 757 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 TNFRSF25Q93038 417 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 HHIPL1Q96JK4 782 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 PICK1Q9NRD5 415 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 CLIC4Q9Y696 253 aa11.63□□□□□ -0.55
DDX41-203ENST00000504781 A0A1W2PQ27 194 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 A0A1W2PQ64 194 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 A0A1W2PQD8 194 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 UNCXA6NJT0 531 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 TMEM232C9JQI7 657 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 SPTLC2O15270 562 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 RAD21O60216 631 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
DDX41-203ENST00000504781 PTPRAP18433 802 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 NF2P35240 595 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 SLC16A2P36021 539 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
DDX41-203ENST00000504781 STAT2P52630 851 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 NAPAP54920 295 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 NOGQ13253 232 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 STK38Q15208 465 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 SYDE2Q5VT97 1194 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 RGMBQ6NW40 437 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 SHISA4Q96DD7 197 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 CDCA5Q96FF9 252 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 ZIC5Q96T25 663 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 PNMA2Q9UL42 364 aa11.62□□□□□ -0.55
DDX41-203ENST00000504781 MYH15Q9Y2K3 1946 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 WDR46O15213 610 aaKnown RBP11.61□□□□□ -0.55
DDX41-203ENST00000504781 INPP5BP32019 993 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 NR5A1Q13285 461 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 PTPAQ15257 358 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 KRT25Q7Z3Z0 450 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 HOMER1Q86YM7 354 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 PRPF38AQ8NAV1 312 aaKnown RBP11.61□□□□□ -0.55
DDX41-203ENST00000504781 ZNF280CQ8ND82 737 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.61□□□□□ -0.55
DDX41-203ENST00000504781 PGBD1Q96JS3 809 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 WRNIP1Q96S55 665 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 CPVLQ9H3G5 476 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 RIC8AQ9NPQ8 531 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
DDX41-203ENST00000504781 CCDC194A0A1B0GVG4 234 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 CA12O43570 354 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 CMA1P23946 247 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 ME1P48163 572 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 IREB2P48200 963 aaKnown RBP11.6□□□□□ -0.55
DDX41-203ENST00000504781 BACE1P56817 501 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 CEBPZQ03701 1054 aaKnown RBP11.6□□□□□ -0.55
DDX41-203ENST00000504781 SPP2Q13103 211 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
DDX41-203ENST00000504781 TTLL12Q14166 644 aaPredicted RBP11.6□□□□□ -0.55
DDX41-203ENST00000504781 GSE1Q14687 1217 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 MAP3K11Q16584 847 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 FBXO11Q86XK2 927 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 ZNF579Q8NAF0 562 aaKnown RBP11.6□□□□□ -0.55
DDX41-203ENST00000504781 GPKOWQ92917 476 aaPredicted RBP eCLIP11.6□□□□□ -0.55
DDX41-203ENST00000504781 CCDC102AQ96A19 550 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 ABHD8Q96I13 439 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 PRR12Q9ULL5 1215 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 PCDHA7Q9UN72 937 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 PCDHA1Q9Y5I3 950 aa11.6□□□□□ -0.55
DDX41-203ENST00000504781 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 CUTAO60888 179 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 ADCY7P51828 1080 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
DDX41-203ENST00000504781 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
DDX41-203ENST00000504781 QRICH1Q2TAL8 776 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 KIAA1755Q5JYT7 1200 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 FAM83BQ5T0W9 1011 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 RASGRP2Q7LDG7 609 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 SPICE1Q8N0Z3 855 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 CUL5Q93034 780 aa11.59□□□□□ -0.55
DDX41-203ENST00000504781 ZKSCAN4Q969J2 545 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms