RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TTBK2Q6IQ55 1244 aa29.83■■■□□ 2.37
PVT1-201ENST00000504719 BTNL9Q6UXG8 535 aa29.83■■■□□ 2.37
PVT1-201ENST00000504719 CHRDL2Q6WN34 429 aa29.83■■■□□ 2.37
PVT1-201ENST00000504719 DNM1LO00429 736 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 SNAP25P60880 206 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 TKFCQ3LXA3 575 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 MAMDC4Q6UXC1 1216 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 C7orf61Q8IZ16 206 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 ACAD9Q9H845 621 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 HOMER2Q9NSB8 354 aa29.82■■■□□ 2.36
PVT1-201ENST00000504719 MCM3APO60318 1980 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 SYNGAP1Q96PV0 1343 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 PDHBP11177 359 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 TAL1P17542 331 aaPredicted RBP29.81■■■□□ 2.36
PVT1-201ENST00000504719 CCDC174Q6PII3 467 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 ZNF467Q7Z7K2 595 aaPredicted RBP29.81■■■□□ 2.36
PVT1-201ENST00000504719 DGKHQ86XP1 1220 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 ARRDC4Q8NCT1 418 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 ZKSCAN3Q9BRR0 538 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 RNF146Q9NTX7 359 aa29.81■■■□□ 2.36
PVT1-201ENST00000504719 FRMPD2Q68DX3 1309 aaPredicted RBP29.8■■■□□ 2.36
PVT1-201ENST00000504719 KDM4AO75164 1064 aa29.8■■■□□ 2.36
PVT1-201ENST00000504719 ZNF865P0CJ78 1059 aaPredicted RBP29.8■■■□□ 2.36
PVT1-201ENST00000504719 CCDC178Q5BJE1 867 aa29.8■■■□□ 2.36
PVT1-201ENST00000504719 RUFY2Q8WXA3 655 aa29.8■■■□□ 2.36
PVT1-201ENST00000504719 TRERF1Q96PN7 1200 aa29.8■■■□□ 2.36
PVT1-201ENST00000504719 SENP6Q9GZR1 1112 aaPredicted RBP29.8■■■□□ 2.36
PVT1-201ENST00000504719 RANBP17Q9H2T7 1088 aaKnown RBP29.8■■■□□ 2.36
PVT1-201ENST00000504719 B4E1Z4 1266 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 SNHG28P0DPA3 235 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 SLC16A2P36021 539 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 GJC2Q5T442 439 aaPredicted RBP29.79■■■□□ 2.36
PVT1-201ENST00000504719 SYDE2Q5VT97 1194 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 IQCA1Q86XH1 822 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 FGD4Q96M96 766 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 GPCPD1Q9NPB8 672 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 CNPY2Q9Y2B0 182 aa29.79■■■□□ 2.36
PVT1-201ENST00000504719 SNAI1O95863 264 aaPredicted RBP29.78■■■□□ 2.36
PVT1-201ENST00000504719 ALAS1P13196 640 aa29.78■■■□□ 2.36
PVT1-201ENST00000504719 LRRC26Q2I0M4 334 aa29.78■■■□□ 2.36
PVT1-201ENST00000504719 BMP2KLQ5H9B9 411 aa29.78■■■□□ 2.36
PVT1-201ENST00000504719 PRO3102Q9H379 93 aa29.78■■■□□ 2.36
PVT1-201ENST00000504719 ZNF543Q08ER8 600 aa29.77■■■□□ 2.36
PVT1-201ENST00000504719 ANKS1AQ92625 1134 aa29.77■■■□□ 2.36
PVT1-201ENST00000504719 KRT23Q9C075 422 aa29.77■■■□□ 2.36
PVT1-201ENST00000504719 A1CFQ9NQ94 594 aaKnown RBP29.77■■■□□ 2.36
PVT1-201ENST00000504719 ZSWIM5Q9P217 1185 aa29.77■■■□□ 2.36
PVT1-201ENST00000504719 ICAM1P05362 532 aa29.76■■■□□ 2.35
PVT1-201ENST00000504719 RARBP10826 455 aa29.76■■■□□ 2.35
PVT1-201ENST00000504719 AKR1A1P14550 325 aa29.76■■■□□ 2.35
PVT1-201ENST00000504719 ZSCAN10Q96SZ4 725 aaPredicted RBP29.76■■■□□ 2.35
PVT1-201ENST00000504719 CNNM2Q9H8M5 875 aa29.76■■■□□ 2.35
PVT1-201ENST00000504719 RBM27Q9P2N5 1060 aaKnown RBP29.76■■■□□ 2.35
PVT1-201ENST00000504719 CCPG1Q9ULG6 757 aa29.76■■■□□ 2.35
PVT1-201ENST00000504719 ZMYND8Q9ULU4 1186 aaPredicted RBP29.76■■■□□ 2.35
PVT1-201ENST00000504719 KBTBD13C9JR72 458 aa29.75■■■□□ 2.35
PVT1-201ENST00000504719 CNTN2Q02246 1040 aa29.75■■■□□ 2.35
PVT1-201ENST00000504719 LRRC41Q15345 812 aa29.75■■■□□ 2.35
PVT1-201ENST00000504719 MUM1L1Q5H9M0 696 aa29.75■■■□□ 2.35
PVT1-201ENST00000504719 FAM133AQ8N9E0 248 aa29.75■■■□□ 2.35
PVT1-201ENST00000504719 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.75■■■□□ 2.35
PVT1-201ENST00000504719 POTEB2H3BUK9 544 aa29.74■■■□□ 2.35
PVT1-201ENST00000504719 PTH1RQ03431 593 aa29.74■■■□□ 2.35
PVT1-201ENST00000504719 XPNPEP3Q9NQH7 507 aa29.74■■■□□ 2.35
PVT1-201ENST00000504719 LCTP09848 1927 aa29.73■■■□□ 2.35
PVT1-201ENST00000504719 SGSM2O43147 1006 aa29.73■■■□□ 2.35
PVT1-201ENST00000504719 ARMCX2Q7L311 632 aa29.73■■■□□ 2.35
PVT1-201ENST00000504719 ENAHQ8N8S7 591 aaPredicted RBP29.73■■■□□ 2.35
PVT1-201ENST00000504719 PNMA1Q8ND90 353 aa29.73■■■□□ 2.35
PVT1-201ENST00000504719 ZHX1Q9UKY1 873 aaPredicted RBP29.73■■■□□ 2.35
PVT1-201ENST00000504719 FAM184BQ9ULE4 1060 aa29.73■■■□□ 2.35
PVT1-201ENST00000504719 MYCNP04198 464 aaPredicted RBP29.72■■■□□ 2.35
PVT1-201ENST00000504719 ACVR2BQ13705 512 aa29.72■■■□□ 2.35
PVT1-201ENST00000504719 GPATCH4Q5T3I0 446 aaKnown RBP29.72■■■□□ 2.35
PVT1-201ENST00000504719 ABHD16BQ9H3Z7 469 aa29.72■■■□□ 2.35
PVT1-201ENST00000504719 KAT14Q9H8E8 782 aa29.72■■■□□ 2.35
PVT1-201ENST00000504719 TNKSO95271 1327 aa29.71■■■□□ 2.35
PVT1-201ENST00000504719 SOWAHBA6NEL2 793 aa29.71■■■□□ 2.35
PVT1-201ENST00000504719 SYN1P17600 705 aa29.71■■■□□ 2.35
PVT1-201ENST00000504719 ATN1P54259 1190 aaPredicted RBP29.71■■■□□ 2.35
PVT1-201ENST00000504719 CCDC144CPQ8IYA2 1237 aa29.71■■■□□ 2.35
PVT1-201ENST00000504719 CYP39A1Q9NYL5 469 aa29.71■■■□□ 2.35
PVT1-201ENST00000504719 PGK1P00558 417 aa29.7■■■□□ 2.35
PVT1-201ENST00000504719 CYP21A2P08686 494 aa29.7■■■□□ 2.35
PVT1-201ENST00000504719 GOLGA8HP0CJ92 632 aa29.7■■■□□ 2.35
PVT1-201ENST00000504719 FXR1P51114 621 aaKnown RBP eCLIP29.7■■■□□ 2.35
PVT1-201ENST00000504719 LENG1Q96BZ8 264 aaPredicted RBP29.7■■■□□ 2.35
PVT1-201ENST00000504719 U3KPZ7 1027 aaPredicted RBP29.7■■■□□ 2.35
PVT1-201ENST00000504719 TRIOBPQ9H2D6 2365 aa29.7■■■□□ 2.34
PVT1-201ENST00000504719 NSMFQ6X4W1 530 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 SLC39A5Q6ZMH5 540 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 RNF180Q86T96 592 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 GDF15Q99988 308 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 UBAC1Q9BSL1 405 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 KATNBL1Q9H079 304 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 PNMA2Q9UL42 364 aa29.69■■■□□ 2.34
PVT1-201ENST00000504719 ASB14A6NK59 587 aa29.68■■■□□ 2.34
PVT1-201ENST00000504719 ADAMTS4O75173 837 aa29.68■■■□□ 2.34
PVT1-201ENST00000504719 ADCYAP1R1P41586 468 aa29.68■■■□□ 2.34
PVT1-201ENST00000504719 CYB5R4Q7L1T6 521 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms