RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CAP1Q01518 475 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 SCRN1Q12765 414 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 HOMER1Q86YM7 354 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 AGBL1Q96MI9 1066 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 PIGSQ96S52 555 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 CFHR5Q9BXR6 569 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 SLKQ9H2G2 1235 aaPredicted RBP15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 RANBP17Q9H2T7 1088 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 SLC38A10Q9HBR0 1119 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 LIMCH1Q9UPQ0 1083 aa15.42■□□□□ 0.06
PDLIM7-212ENST00000504380 ZSWIM8A7E2V4 1837 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 A0A0G2JMZ2 1700 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 ST18O60284 1047 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 PFKFB2O60825 505 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 CTGFP29279 349 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 GNAQP50148 359 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 CDC37Q16543 378 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 GPRC5AQ8NFJ5 357 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 ARHGAP39Q9C0H5 1083 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 PORCNQ9H237 461 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 RIOX1Q9H6W3 641 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 RBM28Q9NW13 759 aaKnown RBP15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 MORF4L1Q9UBU8 362 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 ZNF214Q9UL59 606 aaPredicted RBP15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 RIPK3Q9Y572 518 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 SMCHD1A6NHR9 2005 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 ZNF536O15090 1300 aa15.41■□□□□ 0.06
PDLIM7-212ENST00000504380 PPP1R11O60927 126 aaPredicted RBP15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 FUT2Q10981 343 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 FAM110CQ1W6H9 321 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 QRICH1Q2TAL8 776 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 SNRNP48Q6IEG0 339 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 MB21D1Q8N884 522 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 CD99L2Q8TCZ2 262 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 GTF3C2Q8WUA4 911 aaPredicted RBP15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 ZNF296Q8WUU4 475 aaPredicted RBP15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 PHKBQ93100 1093 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 MOV10L1Q9BXT6 1211 aaKnown RBP15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 SPATC1LQ9H0A9 340 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 EFCC1Q9HA90 598 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 CNTNAP5Q8WYK1 1306 aa15.4■□□□□ 0.06
PDLIM7-212ENST00000504380 NID2Q14112 1375 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 STAT3P40763 770 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 RCAN1P53805 252 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 SP3Q02447 781 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 NTRK3Q16288 839 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 USH1GQ495M9 461 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 WDR78Q5VTH9 848 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 NCAPG2Q86XI2 1143 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 MTMR8Q96EF0 704 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 LZTS2Q9BRK4 669 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 HOMER2Q9NSB8 354 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 V9GY48 417 aaPredicted RBP15.39■□□□□ 0.05
PDLIM7-212ENST00000504380 FKTNO75072 461 aa15.38■□□□□ 0.05
PDLIM7-212ENST00000504380 CTDNEP1O95476 244 aa15.38■□□□□ 0.05
PDLIM7-212ENST00000504380 ALAS1P13196 640 aa15.38■□□□□ 0.05
PDLIM7-212ENST00000504380 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
PDLIM7-212ENST00000504380 SLC26A6Q9BXS9 759 aa15.38■□□□□ 0.05
PDLIM7-212ENST00000504380 CCDC196A0A1B0GTZ2 297 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 CPLX1O14810 134 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 ZBTB5O15062 677 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 ICAM1P05362 532 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 FDX1P10109 184 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 ERCC3P19447 782 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 LACTBP83111 547 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 MUM1L1Q5H9M0 696 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 FBXO11Q86XK2 927 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 RIOX2Q8IUF8 465 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 GTF3C6Q969F1 213 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 COA7Q96BR5 231 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 TMX3Q96JJ7 454 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 ZSCAN31Q96LW9 406 aaPredicted RBP15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 TEX13BQ9BXU2 312 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 MYH6P13533 1939 aa15.37■□□□□ 0.05
PDLIM7-212ENST00000504380 CASP8AP2Q9UKL3 1982 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 PNMA6FA0A0J9YX94 578 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 ATP2A1O14983 1001 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 FMNL1O95466 1100 aaPredicted RBP15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 IFNAR1P17181 557 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 SMARCA1P28370 1054 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 PSMC4P43686 418 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 PPP2R5BQ15173 497 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 GPKOWQ92917 476 aaPredicted RBP eCLIP15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 TRERF1Q96PN7 1200 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 RNF146Q9NTX7 359 aa15.36■□□□□ 0.05
PDLIM7-212ENST00000504380 JAK2O60674 1132 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 OAZ1P54368 228 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 CCNA1P78396 465 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 PRPF38BQ5VTL8 546 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms