RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 CCDC174Q6PII3 467 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 GPR142Q7Z601 462 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 PLEKHH3Q7Z736 793 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 RAB11FIP4Q86YS3 637 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 ADGRF4Q8IZF3 695 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 FANCBQ8NB91 859 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 ALDH8A1Q9H2A2 487 aaPredicted RBP12.95□□□□□ -0.34
VCAN-205ENST00000503923 RBM28Q9NW13 759 aaKnown RBP12.95□□□□□ -0.34
VCAN-205ENST00000503923 SRRDQ9UH36 339 aa12.95□□□□□ -0.34
VCAN-205ENST00000503923 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
VCAN-205ENST00000503923 ZNF536O15090 1300 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 GOLGA8BA8MQT2 603 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 ICAM1P05362 532 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 EVCP57679 992 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 PPP2R5BQ15173 497 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
VCAN-205ENST00000503923 RTN1Q16799 776 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 TKFCQ3LXA3 575 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 CCDC144CPQ8IYA2 1237 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 RIOX1Q9H6W3 641 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 JMJD4Q9H9V9 463 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 VAT1LQ9HCJ6 419 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
VCAN-205ENST00000503923 STRNO43815 780 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 PTPREP23469 700 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 METAP2P50579 478 aaKnown RBP eCLIP12.93□□□□□ -0.34
VCAN-205ENST00000503923 NEK4P51957 841 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 PRKCZQ05513 592 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 TMTC3Q6ZXV5 915 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 CHST13Q8NET6 341 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 MTMR8Q96EF0 704 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 TBC1D32Q96NH3 1257 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 KIF2CQ99661 725 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 NUDT12Q9BQG2 462 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 SPZ1Q9BXG8 430 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 PTPN22Q9Y2R2 807 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 RIPK3Q9Y572 518 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 NID2Q14112 1375 aa12.93□□□□□ -0.34
VCAN-205ENST00000503923 MYH6P13533 1939 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 CCDC196A0A1B0GTZ2 297 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 SLC15A5A6NIM6 579 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 ZBTB5O15062 677 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 CYTH3O43739 400 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 PLEKHA8P1O95397 391 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 FCER1AP12319 257 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 ALAS1P13196 640 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 PDIA3P30101 505 aaKnown RBP12.92□□□□□ -0.34
VCAN-205ENST00000503923 FLT3LGP49771 235 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 GRB14Q14449 540 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 MORN1Q5T089 497 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 FBXO46Q6PJ61 603 aaPredicted RBP12.92□□□□□ -0.34
VCAN-205ENST00000503923 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 ABRAQ8N0Z2 381 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 ZNF274Q96GC6 653 aaPredicted RBP12.92□□□□□ -0.34
VCAN-205ENST00000503923 MMP19Q99542 508 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 ACAD9Q9H845 621 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 PLXNB2O15031 1838 aa12.92□□□□□ -0.34
VCAN-205ENST00000503923 BAZ2BQ9UIF8 2168 aaKnown RBP12.91□□□□□ -0.34
VCAN-205ENST00000503923 RGS2P41220 211 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 AK2P54819 239 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 TRAF1Q13077 416 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 IRF5Q13568 498 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 KCTD2Q14681 263 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 RABEP1Q15276 862 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 COL13A1Q5TAT6 717 aaPredicted RBP12.91□□□□□ -0.34
VCAN-205ENST00000503923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.91□□□□□ -0.34
VCAN-205ENST00000503923 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 SRBD1Q8N5C6 995 aaKnown RBP12.91□□□□□ -0.34
VCAN-205ENST00000503923 IL27Q8NEV9 243 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 RAET1EQ8TD07 263 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 RRP36Q96EU6 259 aaKnown RBP12.91□□□□□ -0.34
VCAN-205ENST00000503923 TRERF1Q96PN7 1200 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 PIGSQ96S52 555 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 AMNQ9BXJ7 453 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 HOMER2Q9NSB8 354 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
VCAN-205ENST00000503923 HPS5Q9UPZ3 1129 aa12.91□□□□□ -0.34
VCAN-205ENST00000503923 ABCB11O95342 1321 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 ZNF236Q9UL36 1845 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 PNMA6FA0A0J9YX94 578 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 ADORA2AP29274 412 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 CDC27P30260 824 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 MAP2K5Q13163 448 aa12.9□□□□□ -0.34
VCAN-205ENST00000503923 USH1GQ495M9 461 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms