RNA–Protein interactions for RNA: ENST00000503197.5

MBD4-204, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 2,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-204ENST00000503197 USP17L22D6RA61 530 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 USP17L17D6RBQ6 530 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 USP17L19D6RCP7 530 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 USP17L20D6RJB6 530 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 TAL1P17542 331 aaPredicted RBP17.52■□□□□ 0.4
MBD4-204ENST00000503197 USP17L24Q0WX57 530 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
MBD4-204ENST00000503197 SNAPC2Q13487 334 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 SPRYD7Q5W111 196 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 FAM173BQ6P4H8 233 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 FAM177A1Q8N128 213 aaPredicted RBP17.52■□□□□ 0.4
MBD4-204ENST00000503197 ADAMTS5Q9UNA0 930 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 ZNF536O15090 1300 aa17.52■□□□□ 0.4
MBD4-204ENST00000503197 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.396e-12■■■□□ 15.8
MBD4-204ENST00000503197 HOXA7P31268 230 aaPredicted RBP17.52■□□□□ 0.39
MBD4-204ENST00000503197 NAPAP54920 295 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 NLRP5P59047 1200 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 NR5A1Q13285 461 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 FOXD4L6Q3SYB3 417 aaPredicted RBP17.52■□□□□ 0.39
MBD4-204ENST00000503197 GPAT2Q6NUI2 795 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 FOXD4L3Q6VB84 417 aaPredicted RBP17.52■□□□□ 0.39
MBD4-204ENST00000503197 ATG4CQ96DT6 458 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 AMNQ9BXJ7 453 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 ZMYND12Q9H0C1 365 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 SLC38A10Q9HBR0 1119 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 PCDHA1Q9Y5I3 950 aa17.52■□□□□ 0.39
MBD4-204ENST00000503197 COL11A1P12107 1806 aaPredicted RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 ZBTB48P10074 688 aaPredicted RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 DSG3P32926 999 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 COG2Q14746 738 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 FBXO11Q86XK2 927 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 AGTPBP1Q9UPW5 1226 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 TLL2Q9Y6L7 1015 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 MYH15Q9Y2K3 1946 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 VWA5AO00534 786 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 POTEEQ6S8J3 1075 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 FASTKD5Q7L8L6 764 aaKnown RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 CCDC12Q8WUD4 166 aaPredicted RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
MBD4-204ENST00000503197 PCDHA4Q9UN74 947 aa17.51■□□□□ 0.39
MBD4-204ENST00000503197 SMCO2A6NFE2 343 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 SPDYE16A6NNV3 312 aaPredicted RBP17.5■□□□□ 0.39
MBD4-204ENST00000503197 M0R2N6 131 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 CALML3P27482 149 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 KRT2P35908 639 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 FSTL1Q12841 308 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 SAFBQ15424 915 aaKnown RBP eCLIP17.5■□□□□ 0.39
MBD4-204ENST00000503197 USH1GQ495M9 461 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 PPP1R18Q6NYC8 613 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 RASAL3Q86YV0 1011 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 REPS2Q8NFH8 660 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 MYPNQ86TC9 1320 aa17.5■□□□□ 0.39
MBD4-204ENST00000503197 A0A0G2JMZ2 1700 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 ZNF157P51786 506 aaPredicted RBP17.49■□□□□ 0.39
MBD4-204ENST00000503197 GTF2A2P52657 109 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 DAGLBQ8NCG7 672 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 TMEM88BA6NKF7 163 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 OPLAHO14841 1288 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 BAG4O95429 457 aaKnown RBP17.49■□□□□ 0.39
MBD4-204ENST00000503197 ICAM1P05362 532 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
MBD4-204ENST00000503197 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
MBD4-204ENST00000503197 GALNT17Q6IS24 598 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 RGMBQ6NW40 437 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 BRAPQ7Z569 592 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 BLIDQ8IZY5 108 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 BRI3BPQ8WY22 251 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 AGBL1Q96MI9 1066 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 HOXC10Q9NYD6 342 aa17.49■□□□□ 0.39
MBD4-204ENST00000503197 TCHHQ07283 1943 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 PCNTO95613 3336 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 FDX1P10109 184 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 CETPP11597 493 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 ASCC2Q9H1I8 757 aaPredicted RBP17.48■□□□□ 0.39
MBD4-204ENST00000503197 CCL15-CCL14A0A0B4J2E2 113 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 FAM205CA6NFA0 338 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
MBD4-204ENST00000503197 CCL15Q16663 113 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 RASGRP4Q8TDF6 673 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 P2RX7Q99572 595 aaKnown RBP17.48■□□□□ 0.39
MBD4-204ENST00000503197 RAVER2Q9HCJ3 691 aaKnown RBP17.48■□□□□ 0.39
MBD4-204ENST00000503197 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 C6orf50Q9HD87 102 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
MBD4-204ENST00000503197 ZBED4O75132 1171 aa17.47■□□□□ 0.39
MBD4-204ENST00000503197 GNA11P29992 359 aa17.47■□□□□ 0.39
MBD4-204ENST00000503197 GNL2Q13823 731 aaKnown RBP17.47■□□□□ 0.39
MBD4-204ENST00000503197 CPXCR1Q8N123 301 aa17.47■□□□□ 0.39
MBD4-204ENST00000503197 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
MBD4-204ENST00000503197 PCDHA6Q9UN73 950 aa17.47■□□□□ 0.39
MBD4-204ENST00000503197 PCDHA8Q9Y5H6 950 aa17.47■□□□□ 0.39
MBD4-204ENST00000503197 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms