RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 ANKRD35Q8N283 1001 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 TMEM199Q8N511 208 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 KBTBD3Q8NAB2 608 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 GMCL1P1Q8NEA9 526 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 OSBP2Q969R2 916 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 KATNBL1Q9H079 304 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 RAVER2Q9HCJ3 691 aaKnown RBP16.4■□□□□ 0.22
DDR1-247ENST00000502955 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 PLIN4Q96Q06 1357 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 CTAGE5O15320 804 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 GNAT2P19087 354 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 IRX5P78411 483 aaPredicted RBP16.39■□□□□ 0.21
DDR1-247ENST00000502955 PSRC1Q6PGN9 363 aaPredicted RBP16.39■□□□□ 0.21
DDR1-247ENST00000502955 ARMCX2Q7L311 632 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 APPBP2Q92624 585 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 PBX4Q9BYU1 374 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
DDR1-247ENST00000502955 ECHDC1Q9NTX5 307 aa16.39■□□□□ 0.21
DDR1-247ENST00000502955 CTDP1Q9Y5B0 961 aaPredicted RBP16.39■□□□□ 0.21
DDR1-247ENST00000502955 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 TLR3O15455 904 aaKnown RBP16.38■□□□□ 0.21
DDR1-247ENST00000502955 TTLL1O95922 423 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 CD4P01730 458 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 ZFYP08048 801 aaPredicted RBP16.38■□□□□ 0.21
DDR1-247ENST00000502955 CSF2RAP15509 400 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 CCDC144CPQ8IYA2 1237 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
DDR1-247ENST00000502955 FAM133AQ8N9E0 248 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 SLC43A3Q8NBI5 491 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 CHD7Q9P2D1 2997 aa16.38■□□□□ 0.21
DDR1-247ENST00000502955 AKNAD1Q5T1N1 836 aa16.37■□□□□ 0.21
DDR1-247ENST00000502955 GAS2L1Q99501 681 aaPredicted RBP16.37■□□□□ 0.21
DDR1-247ENST00000502955 SEZ6LQ9BYH1 1024 aa16.37■□□□□ 0.21
DDR1-247ENST00000502955 XIRP2A4UGR9 3374 aa16.37■□□□□ 0.21
DDR1-247ENST00000502955 RNF113AO15541 343 aaKnown RBP16.36■□□□□ 0.21
DDR1-247ENST00000502955 GPAA1O43292 621 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 SMARCA5O60264 1052 aaPredicted RBP16.36■□□□□ 0.21
DDR1-247ENST00000502955 BMP3P12645 472 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 PBX2P40425 430 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 SLC4A3P48751 1232 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 ATXN2LQ8WWM7 1075 aaKnown RBP16.36■□□□□ 0.21
DDR1-247ENST00000502955 HERVK_113Q902F9 699 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 VTI1AQ96AJ9 217 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 ACAD9Q9H845 621 aa16.36■□□□□ 0.21
DDR1-247ENST00000502955 GNEQ9Y223 722 aaKnown RBP16.36■□□□□ 0.21
DDR1-247ENST00000502955 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
DDR1-247ENST00000502955 TNFRSF10AO00220 468 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 PRDM1O75626 825 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 CABYRO75952 493 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 TDO2P48775 406 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 STAT2P52630 851 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 CNTN2Q02246 1040 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 TNFAIP2Q03169 654 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 GMCL1Q96IK5 515 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 PPP1R12CQ9BZL4 782 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 IL23AQ9NPF7 189 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 A1CFQ9NQ94 594 aaKnown RBP16.35■□□□□ 0.21
DDR1-247ENST00000502955 LRRC37A2A6NM11 1700 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 ASTN1O14525 1302 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 ZNF536O15090 1300 aa16.35■□□□□ 0.21
DDR1-247ENST00000502955 MYO9BQ13459 2157 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.34■□□□□ 0.21
DDR1-247ENST00000502955 ASB14A6NK59 587 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 GRXCR1A8MXD5 290 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 PLA2G6O60733 806 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 ACRP10323 421 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 RAB30Q15771 203 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 TKFCQ3LXA3 575 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 FAM160B2Q86V87 743 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 IFNL3Q8IZI9 196 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 LRRC47Q8N1G4 583 aaKnown RBP16.34■□□□□ 0.21
DDR1-247ENST00000502955 CHURC1Q8WUH1 139 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 HOMER2Q9NSB8 354 aa16.34■□□□□ 0.21
DDR1-247ENST00000502955 TMEM232C9JQI7 657 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 M0R2C6 588 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 TSPY3P0CV98 308 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 TSPY8P0CW00 308 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 CYP2C18P33260 490 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 BEX3Q00994 111 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 PDE4BQ07343 736 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 LRRFIP1Q32MZ4 808 aaKnown RBP16.33■□□□□ 0.2
DDR1-247ENST00000502955 TLK2Q86UE8 772 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 MIER1Q8N108 512 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 STAG1Q8WVM7 1258 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 MTIF3Q9H2K0 278 aaKnown RBP16.33■□□□□ 0.2
DDR1-247ENST00000502955 HIPK3Q9H422 1215 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 PRDM12Q9H4Q4 367 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 MSRAQ9UJ68 235 aa16.33■□□□□ 0.2
DDR1-247ENST00000502955 Q9Y3F1 56 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms