RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 BMP3P12645 472 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 TAL1P17542 331 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 STAT2P52630 851 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ANO1Q5XXA6 986 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 FAM133AQ8N9E0 248 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 SLC43A3Q8NBI5 491 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 MORC4Q8TE76 937 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 CHURC1Q8WUH1 139 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 SYMPKQ92797 1274 aaKnown RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 FERMT2Q96AC1 680 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 CEP95Q96GE4 821 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 FGD4Q96M96 766 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 COL25A1Q9BXS0 654 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 TTYH1Q9H313 450 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ACAD9Q9H845 621 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 EPB41L4AQ9HCS5 686 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 PRDM5Q9NQX1 630 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 TMEM39AQ9NV64 488 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 CLIP2Q9UDT6 1046 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ANAPC4Q9UJX5 808 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ZNF536O15090 1300 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 ZMYM6O95789 1325 aa7.27□□□□□ -1.25
LSM3P4-201ENST00000502948 A0A0C4DFX4 3053 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 MINDY4BA8MYZ0 360 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 ARVCFO00192 962 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 CTAGE5O15320 804 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 CD4P01730 458 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 ASGR1P07306 291 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 TSPY3P0CV98 308 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 TSPY8P0CW00 308 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 TDO2P48775 406 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 PPIGQ13427 754 aaKnown RBP eCLIP7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 KCNA10Q16322 511 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 CCDC144BQ3MJ40 725 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 ZMYM1Q5SVZ6 1142 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 PSRC1Q6PGN9 363 aaPredicted RBP7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 ARMCX2Q7L311 632 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 FAM126BQ8IXS8 530 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 ANKRD35Q8N283 1001 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 PI4K2BQ8TCG2 481 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 STAG1Q8WVM7 1258 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 RNPC3Q96LT9 517 aaKnown RBP7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 GNEQ9Y223 722 aaKnown RBP7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 SALL3Q9BXA9 1300 aa7.26□□□□□ -1.25
LSM3P4-201ENST00000502948 M0R2C6 588 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 TLR3O15455 904 aaKnown RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 SMARCA5O60264 1052 aaPredicted RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 PQBP1O60828 265 aaKnown RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 PCP11498 1178 aaKnown RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 EPHB4P54760 987 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 PPARAQ07869 468 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 ALX1Q15699 326 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 SLFN13Q68D06 897 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 IQSEC1Q6DN90 963 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 BTNL9Q6UXG8 535 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 CCDC144CPQ8IYA2 1237 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 CPXCR1Q8N123 301 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 TMEM199Q8N511 208 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 MAFAQ8NHW3 353 aaPredicted RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 KIFC2Q96AC6 838 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 NUP88Q99567 741 aaPredicted RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 NAPBQ9H115 298 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 RAVER2Q9HCJ3 691 aaKnown RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 A1CFQ9NQ94 594 aaKnown RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 TCP11L1Q9NUJ3 509 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 CTDP1Q9Y5B0 961 aaPredicted RBP7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 CUL9Q8IWT3 2517 aa7.25□□□□□ -1.25
LSM3P4-201ENST00000502948 EYSQ5T1H1 3165 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 SCN10AQ9Y5Y9 1956 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 GBF1Q92538 1859 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 RBM47A0AV96 593 aaKnown RBP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 TMEM232C9JQI7 657 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 FOXP2O15409 715 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ADCY6O43306 1168 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ORC4O43929 436 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ZEB2O60315 1214 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 APPP05067 770 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 PFKMP08237 780 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 C6orf222P0C671 652 aaPredicted RBP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 DNAJB2P25686 324 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 SLC1A4P43007 532 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 TFAP4Q01664 338 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 TNFAIP2Q03169 654 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 AAMPQ13685 434 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 GNASQ5JWF2 1037 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 TMEM240Q5SV17 173 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 AKNAD1Q5T1N1 836 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 C20orf194Q5TEA3 1177 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 DCAF4Q8WV16 495 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 HERVK_113Q902F9 699 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 TTC14Q96N46 770 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 MTIF3Q9H2K0 278 aaKnown RBP7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 ZNF576Q9H609 170 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 VTA1Q9NP79 307 aa7.24□□□□□ -1.25
LSM3P4-201ENST00000502948 IL17RBQ9NRM6 502 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms