RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 HDAC2Q92769 488 aaKnown RBP4.35□□□□□ -1.71
SUB1-202ENST00000502453 THAP11Q96EK4 314 aa4.35□□□□□ -1.71
SUB1-202ENST00000502453 DDX21Q9NR30 783 aaKnown RBP eCLIP4.35□□□□□ -1.71
SUB1-202ENST00000502453 PCDHB3Q9Y5E6 796 aa4.35□□□□□ -1.71
SUB1-202ENST00000502453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.35□□□□□ -1.71
SUB1-202ENST00000502453 POTEMA6NI47 508 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 ZNF891A8MT65 544 aaPredicted RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 GOLGA6L22H0YM25 854 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 FOSL1P15407 271 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 TRPC1P48995 793 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 COPS2P61201 443 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 LSM11P83369 360 aaKnown RBP eCLIP4.34□□□□□ -1.713e-6■■■□□ 18.3
SUB1-202ENST00000502453 CCDC38Q502W7 563 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 ZC3H12BQ5HYM0 836 aaKnown RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 RETSATQ6NUM9 610 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 HIBCHQ6NVY1 386 aaPredicted RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 MICALL1Q8N3F8 863 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 FAM156AQ8NDB6 213 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 GLIS3Q8NEA6 775 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 OR2W6PQ8NHA6 318 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 KISS1RQ969F8 398 aaPredicted RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 SDF4Q9BRK5 362 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 SMOC1Q9H4F8 434 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 PLEKHA5Q9HAU0 1116 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 TBC1D22BQ9NU19 505 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 TRAK1Q9UPV9 953 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 BCS1LQ9Y276 419 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 A6NNZ2 444 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 IPO5O00410 1097 aaKnown RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 MTHFD1P11586 935 aaKnown RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 SKILP12757 684 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 IDEP14735 1019 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 HEATR4Q86WZ0 1026 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 IL17REQ8NFR9 667 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 GATAD2BQ8WXI9 593 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 FMNL2Q96PY5 1086 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 MTFR1LQ9H019 292 aa4.34□□□□□ -1.71
SUB1-202ENST00000502453 FNDC3AQ9Y2H6 1198 aaKnown RBP4.34□□□□□ -1.71
SUB1-202ENST00000502453 FSD2A1L4K1 749 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 PES1O00541 588 aaKnown RBP4.34□□□□□ -1.72
SUB1-202ENST00000502453 KHNYNO15037 678 aaKnown RBP4.34□□□□□ -1.72
SUB1-202ENST00000502453 NCAM2O15394 837 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 IMPDH2P12268 514 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 ATP1A3P13637 1013 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 RAG1P15918 1043 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 POLR2BP30876 1174 aaKnown RBP4.34□□□□□ -1.72
SUB1-202ENST00000502453 ERVK-9P63128 1117 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 ROR1Q01973 937 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 SLMAPQ14BN4 828 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 TERF2Q15554 542 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 LONRF2Q1L5Z9 754 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 CCDC158Q5M9N0 1113 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 KIAA1614Q5VZ46 1190 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 AGMOQ6ZNB7 445 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 SV2BQ7L1I2 683 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 CYP2U1Q7Z449 544 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 IQCA1Q86XH1 822 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 CBARPQ8N350 705 aaPredicted RBP4.34□□□□□ -1.72
SUB1-202ENST00000502453 ZDHHC1Q8WTX9 485 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 VMP1Q96GC9 406 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 FAM210AQ96ND0 272 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 SLC4A9Q96Q91 983 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 MRFAP1Q9Y605 127 aa4.34□□□□□ -1.72
SUB1-202ENST00000502453 A0A087WZG4 1122 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 C19orf81C9J6K1 198 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 BAIAP3O94812 1187 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 GALNSP34059 522 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 HOXD12P35452 270 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 MAPK10P53779 464 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 TAF5Q15542 800 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 PTPN14Q15678 1187 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 FASTKD5Q7L8L6 764 aaKnown RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 RASGRP2Q7LDG7 609 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 TRMT44Q8IYL2 757 aaKnown RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 ZSCAN1Q8NBB4 408 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 ZBTB34Q8NCN2 500 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 SLC7A14Q8TBB6 771 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 ZFPM2Q8WW38 1151 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 AHCYL2Q96HN2 611 aaKnown RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 UBXN10Q96LJ8 280 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 PDLIM7Q9NR12 457 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 ARHGEF4Q9NR80 690 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 IRAK4Q9NWZ3 460 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 GPN3Q9UHW5 284 aaPredicted RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 TTLL3Q9Y4R7 772 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 MYO15BQ96JP2 1530 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 EIF3FO00303 357 aaPredicted RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 HSD3B1P14060 373 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 HSPA6P17066 643 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 PAX7P23759 505 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 KIF5BP33176 963 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 GRK6P43250 576 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 HTRA3P83110 453 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 ZNF252P-AS1Q0IIN9 211 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 MAP7Q14244 749 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 SMAD1Q15797 465 aaKnown RBP4.33□□□□□ -1.72
SUB1-202ENST00000502453 PIK3R6Q5UE93 754 aa4.33□□□□□ -1.72
SUB1-202ENST00000502453 SPOCD1Q6ZMY3 1216 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms