RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 FOXD4L1Q9NU39 408 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 PNMA3Q9UL41 463 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 SMC3Q9UQE7 1217 aa22.62■■□□□ 1.21
LINC01550-201ENST00000499006 HSP90AA1P07900 732 aaKnown RBP22.61■■□□□ 1.21
LINC01550-201ENST00000499006 GJB2P29033 226 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 SNAP25P60880 206 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 HERVK_113P62684 666 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
LINC01550-201ENST00000499006 PFKFB3Q16875 520 aaPredicted RBP22.61■■□□□ 1.21
LINC01550-201ENST00000499006 QRICH1Q2TAL8 776 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 SAMD1Q6SPF0 538 aaPredicted RBP22.61■■□□□ 1.21
LINC01550-201ENST00000499006 HOMER1Q86YM7 354 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 PIBF1Q8WXW3 757 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 PCNTO95613 3336 aa22.61■■□□□ 1.21
LINC01550-201ENST00000499006 PPP1R11O60927 126 aaPredicted RBP22.6■■□□□ 1.21
LINC01550-201ENST00000499006 REM2Q8IYK8 340 aaPredicted RBP22.6■■□□□ 1.21
LINC01550-201ENST00000499006 SPRYD3Q8NCJ5 442 aa22.6■■□□□ 1.21
LINC01550-201ENST00000499006 SEC63Q9UGP8 760 aaKnown RBP22.6■■□□□ 1.21
LINC01550-201ENST00000499006 ZNF536O15090 1300 aa22.6■■□□□ 1.21
LINC01550-201ENST00000499006 SCG2P13521 617 aa22.6■■□□□ 1.21
LINC01550-201ENST00000499006 AIFM3Q96NN9 605 aa22.6■■□□□ 1.21
LINC01550-201ENST00000499006 RBBP6Q7Z6E9 1792 aaKnown RBP22.6■■□□□ 1.21
LINC01550-201ENST00000499006 ZBED4O75132 1171 aa22.59■■□□□ 1.21
LINC01550-201ENST00000499006 CYP2C8P10632 490 aa22.59■■□□□ 1.21
LINC01550-201ENST00000499006 MAP2K2P36507 400 aa22.59■■□□□ 1.21
LINC01550-201ENST00000499006 MB21D1Q8N884 522 aa22.59■■□□□ 1.21
LINC01550-201ENST00000499006 ATP2A1O14983 1001 aa22.58■■□□□ 1.2
LINC01550-201ENST00000499006 OAZ1P54368 228 aa22.58■■□□□ 1.2
LINC01550-201ENST00000499006 TMEM132BQ14DG7 1078 aa22.58■■□□□ 1.2
LINC01550-201ENST00000499006 OTUD7BQ6GQQ9 843 aa22.58■■□□□ 1.2
LINC01550-201ENST00000499006 WASF1Q92558 559 aa22.58■■□□□ 1.2
LINC01550-201ENST00000499006 PARK7Q99497 189 aaKnown RBP22.58■■□□□ 1.2
LINC01550-201ENST00000499006 ZNF214Q9UL59 606 aaPredicted RBP22.58■■□□□ 1.2
LINC01550-201ENST00000499006 ICAM1P05362 532 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 WWC2Q6AWC2 1192 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 CCDC174Q6PII3 467 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 FBXO11Q86XK2 927 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 FAM184AQ8NB25 1140 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 GTF3C2Q8WUA4 911 aaPredicted RBP22.57■■□□□ 1.2
LINC01550-201ENST00000499006 SHISA4Q96DD7 197 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 ALG1Q9BT22 464 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 BARHL2Q9NY43 387 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
LINC01550-201ENST00000499006 ADGRA2Q96PE1 1338 aa22.57■■□□□ 1.2
LINC01550-201ENST00000499006 hCG_1984214I3L0E3 225 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 STXBP3O00186 592 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 CNMDO75829 334 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 ZNF713Q8N859 430 aaPredicted RBP22.56■■□□□ 1.2
LINC01550-201ENST00000499006 GPKOWQ92917 476 aaPredicted RBP eCLIP22.56■■□□□ 1.2
LINC01550-201ENST00000499006 AMNQ9BXJ7 453 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 CWC22Q9HCG8 908 aaKnown RBP22.56■■□□□ 1.2
LINC01550-201ENST00000499006 BTBD7Q9P203 1132 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 RBPJLQ9UBG7 517 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 RABGAP1Q9Y3P9 1069 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 CEP350Q5VT06 3117 aa22.56■■□□□ 1.2
LINC01550-201ENST00000499006 ZNFX1Q9P2E3 1918 aaKnown RBP22.56■■□□□ 1.2
LINC01550-201ENST00000499006 TYW1BQ6NUM6 668 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 HEATR3Q7Z4Q2 680 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 SMCR8Q8TEV9 937 aaPredicted RBP22.55■■□□□ 1.2
LINC01550-201ENST00000499006 COA7Q96BR5 231 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 AGBL1Q96MI9 1066 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 RAVER2Q9HCJ3 691 aaKnown RBP22.55■■□□□ 1.2
LINC01550-201ENST00000499006 TXNRD2Q9NNW7 524 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 SH3GLB2Q9NR46 395 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 KIF3AQ9Y496 699 aa22.55■■□□□ 1.2
LINC01550-201ENST00000499006 GCLCP48506 637 aaPredicted RBP22.54■■□□□ 1.2
LINC01550-201ENST00000499006 TAF1CQ15572 869 aaPredicted RBP22.54■■□□□ 1.2
LINC01550-201ENST00000499006 CPXCR1Q8N123 301 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 GJB4Q9NTQ9 266 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 PNMA2Q9UL42 364 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
LINC01550-201ENST00000499006 PCDHA1Q9Y5I3 950 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 PEX10O60683 326 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 ALDH1A1P00352 501 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 TAL1P17542 331 aaPredicted RBP22.54■■□□□ 1.2
LINC01550-201ENST00000499006 USH1GQ495M9 461 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 FAM177A1Q8N128 213 aaPredicted RBP22.54■■□□□ 1.2
LINC01550-201ENST00000499006 RGS22Q8NE09 1264 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 VPS54Q9P1Q0 977 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 CCPG1Q9ULG6 757 aa22.54■■□□□ 1.2
LINC01550-201ENST00000499006 MGAMO43451 1857 aa22.53■■□□□ 1.2
LINC01550-201ENST00000499006 DDIT3P35638 169 aa22.53■■□□□ 1.2
LINC01550-201ENST00000499006 TRAF1Q13077 416 aa22.53■■□□□ 1.2
LINC01550-201ENST00000499006 TEX13BQ9BXU2 312 aa22.53■■□□□ 1.2
LINC01550-201ENST00000499006 RIPK3Q9Y572 518 aa22.53■■□□□ 1.2
LINC01550-201ENST00000499006 CA12O43570 354 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 STAT3P40763 770 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 Q3C1V9 767 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 LARP1BQ659C4 914 aaKnown RBP22.52■■□□□ 1.2
LINC01550-201ENST00000499006 SNRNP48Q6IEG0 339 aaKnown RBP22.52■■□□□ 1.2
LINC01550-201ENST00000499006 PPP1R18Q6NYC8 613 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 FBXO18Q8NFZ0 1043 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 C8orf76Q96K31 380 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 PAGR1Q9BTK6 254 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 SPATC1LQ9H0A9 340 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 MORF4L1Q9UBU8 362 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 ABCB11O95342 1321 aa22.52■■□□□ 1.2
LINC01550-201ENST00000499006 TLR2O60603 784 aa22.51■■□□□ 1.19
LINC01550-201ENST00000499006 XBP1P17861 261 aa22.51■■□□□ 1.19
LINC01550-201ENST00000499006 PDCP20941 246 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms