RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 ZIM2Q9NZV7 527 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 KIAA1468Q9P260 1216 aa10.16□□□□□ -0.78
FN1-227ENST00000498719 ECM29Q5VYK3 1845 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 PIP5K1CO60331 668 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 ZNF202O95125 648 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 PDE8BO95263 885 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 TRDNQ13061 729 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 AXDND1Q5T1B0 1012 aaPredicted RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 SYNE3Q6ZMZ3 975 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 MTERF4Q7Z6M4 381 aaKnown RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 DDX42Q86XP3 938 aaKnown RBP eCLIP10.15□□□□□ -0.78
FN1-227ENST00000498719 KCNG4Q8TDN1 519 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 MYCBPQ99417 103 aaPredicted RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 ZNF700Q9H0M5 742 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 BTG4Q9NY30 223 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 SIRPGQ9P1W8 387 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 ANGEL1Q9UNK9 670 aaKnown RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
FN1-227ENST00000498719 ZNF335Q9H4Z2 1342 aaPredicted RBP10.15□□□□□ -0.78
FN1-227ENST00000498719 A0A1W2PQ27 194 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 A0A1W2PQ64 194 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 A0A1W2PQD8 194 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 CYP19A1P11511 503 aaPredicted RBP10.15□□□□□ -0.79
FN1-227ENST00000498719 SKILP12757 684 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 PDE6AP16499 860 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 METAP2P50579 478 aaKnown RBP eCLIP10.15□□□□□ -0.79
FN1-227ENST00000498719 GEMIN4P57678 1058 aaKnown RBP10.15□□□□□ -0.79
FN1-227ENST00000498719 PLCB3Q01970 1234 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 SETDB1Q15047 1291 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 ANO1Q5XXA6 986 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 STK11IPQ8N1F8 1099 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 SPDYE1Q8NFV5 336 aaPredicted RBP10.15□□□□□ -0.79
FN1-227ENST00000498719 ALG1Q9BT22 464 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 RETREG1Q9H6L5 497 aa10.15□□□□□ -0.79
FN1-227ENST00000498719 TRMT1Q9NXH9 659 aaKnown RBP10.15□□□□□ -0.79
FN1-227ENST00000498719 CDHR2Q9BYE9 1310 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 YEATS4O95619 227 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 PFKFB1P16118 471 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 ZBED6P86452 979 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 APOA5Q6Q788 366 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 GPRASP2Q96D09 838 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 TEX13AQ9BXU3 409 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 EVLQ9UI08 416 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 NOD1Q9Y239 953 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 TACC3Q9Y6A5 838 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 CHD4Q14839 1912 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 TCRBV5S4A2TA0A5A2 114 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 SH2B2O14492 632 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 CTIFO43310 598 aaKnown RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 CBFA2T2O43439 604 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 KCNQ2O43526 872 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 CCZ1BP86790 482 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 CCZ1P86791 482 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 RAB33AQ14088 237 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 BRAPQ7Z569 592 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 CCDC94Q9BW85 323 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 SEZ6LQ9BYH1 1024 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 EPB41L4AQ9HCS5 686 aaPredicted RBP10.14□□□□□ -0.79
FN1-227ENST00000498719 CCDC87Q9NVE4 849 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 ANKRD36CQ5JPF3 1778 aa10.14□□□□□ -0.79
FN1-227ENST00000498719 ZMYM6O95789 1325 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 RANBP6O60518 1105 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 SLC3A2P08195 630 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 TDO2P48775 406 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 C21orf62-AS1Q17RA5 79 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 KRT40Q6A162 431 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 CLIC6Q96NY7 704 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 GGT7Q9UJ14 662 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 ABCC12Q96J65 1359 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 SLIT2O94813 1529 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 UBE3CQ15386 1083 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 ZRSR1Q15695 479 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 NFXL1Q6ZNB6 911 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 DZIP3Q86Y13 1208 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 MAGEB6Q8N7X4 407 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 IGDCC4Q8TDY8 1250 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 AIDAQ96BJ3 306 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 CRELD1Q96HD1 420 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 STRBPQ96SI9 672 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 TRIM55Q9BYV6 548 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 XPO4Q9C0E2 1151 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 NAT10Q9H0A0 1025 aaKnown RBP10.13□□□□□ -0.79
FN1-227ENST00000498719 SEC31BQ9NQW1 1179 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 IFNKQ9P0W0 207 aa10.13□□□□□ -0.79
FN1-227ENST00000498719 ATRNO75882 1429 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 LRP6O75581 1613 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 A0A0G2JS52 829 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 ZBTB24O43167 697 aaPredicted RBP10.12□□□□□ -0.79
FN1-227ENST00000498719 PRKAB2O43741 272 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 PDE8AO60658 829 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 SMC2O95347 1197 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 EPB42P16452 691 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 CNGA1P29973 690 aa10.12□□□□□ -0.79
FN1-227ENST00000498719 RBM6P78332 1123 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms