RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IFIT2P09913 472 aaKnown RBP14.01□□□□□ -0.17
CDK9-205ENST00000498339 CCL23P55773 120 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 GJA9P57773 515 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 BEX3Q00994 111 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 TFF2Q03403 129 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 C12orf60Q5U649 245 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 MAMDC4Q6UXC1 1216 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 ARMCX2Q7L311 632 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
CDK9-205ENST00000498339 KIFC2Q96AC6 838 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 UPF3AQ9H1J1 476 aaKnown RBP14.01□□□□□ -0.17
CDK9-205ENST00000498339 ISY1Q9ULR0 285 aaKnown RBP14.01□□□□□ -0.17
CDK9-205ENST00000498339 RIPK3Q9Y572 518 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 KCNQ1P51787 676 aa14□□□□□ -0.17
CDK9-205ENST00000498339 SLFNL1Q499Z3 407 aa14□□□□□ -0.17
CDK9-205ENST00000498339 HSP90AB4PQ58FF6 505 aa14□□□□□ -0.17
CDK9-205ENST00000498339 CEP85Q6P2H3 762 aa14□□□□□ -0.17
CDK9-205ENST00000498339 STK11IPQ8N1F8 1099 aa14□□□□□ -0.17
CDK9-205ENST00000498339 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
CDK9-205ENST00000498339 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.17
CDK9-205ENST00000498339 RAVER2Q9HCJ3 691 aaKnown RBP14□□□□□ -0.17
CDK9-205ENST00000498339 HOMER2Q9NSB8 354 aa14□□□□□ -0.17
CDK9-205ENST00000498339 SLC4A7Q9Y6M7 1214 aa14□□□□□ -0.17
CDK9-205ENST00000498339 SCN5AQ14524 2016 aa14□□□□□ -0.17
CDK9-205ENST00000498339 UMODL1Q5DID0 1318 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 GTPBP6O43824 516 aaPredicted RBP13.99□□□□□ -0.17
CDK9-205ENST00000498339 CD4P01730 458 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 MYOGP15173 224 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 ADD2P35612 726 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 TLK2Q86UE8 772 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 PRPF38AQ8NAV1 312 aaKnown RBP13.99□□□□□ -0.17
CDK9-205ENST00000498339 RHPN1Q8TCX5 695 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 FBXO40Q9UH90 709 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 SLC4A4Q9Y6R1 1079 aa13.99□□□□□ -0.17
CDK9-205ENST00000498339 NDUFB10O96000 172 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 TNFAIP2Q03169 654 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 ITGA7Q13683 1181 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.98□□□□□ -0.17
CDK9-205ENST00000498339 AP5M1Q9H0R1 490 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 MKNK2Q9HBH9 465 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 PCDHA11Q9Y5I1 949 aa13.98□□□□□ -0.17
CDK9-205ENST00000498339 COL4A4P53420 1690 aaPredicted RBP13.98□□□□□ -0.17
CDK9-205ENST00000498339 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.97□□□□□ -0.17
CDK9-205ENST00000498339 F5H6K3 240 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 ZEB2O60315 1214 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 CABYRO75952 493 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 BMP1P13497 986 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
CDK9-205ENST00000498339 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CDK9-205ENST00000498339 KLRC3Q07444 240 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 RPUSD2Q8IZ73 545 aaKnown RBP13.97□□□□□ -0.17
CDK9-205ENST00000498339 SCLYQ96I15 445 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 BOLA2Q9H3K6 86 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 CERS4Q9HA82 394 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
CDK9-205ENST00000498339 TANC1Q9C0D5 1861 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 TRANK1O15050 2925 aa13.97□□□□□ -0.17
CDK9-205ENST00000498339 PRRC2BQ5JSZ5 2229 aaKnown RBP13.96□□□□□ -0.17
CDK9-205ENST00000498339 BDP1A6H8Y1 2624 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 B4GALT4O60513 344 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 RLBP1P12271 317 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
CDK9-205ENST00000498339 CTR9Q6PD62 1173 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 CHST13Q8NET6 341 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 KIF1BPQ96EK5 621 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 FGD4Q96M96 766 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 NOC4LQ9BVI4 516 aaKnown RBP13.96□□□□□ -0.17
CDK9-205ENST00000498339 TRPV6Q9H1D0 765 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 WNT8AQ9H1J5 351 aa13.96□□□□□ -0.17
CDK9-205ENST00000498339 RFXAPO00287 272 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 ATP2A1O14983 1001 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 ERC2O15083 957 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 CA3P07451 260 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 PSMC6P62333 389 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 CNTN2Q02246 1040 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
CDK9-205ENST00000498339 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 DEFB128Q7Z7B8 93 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDK9-205ENST00000498339 ACAD9Q9H845 621 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 SLC38A10Q9HBR0 1119 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 CLIP2Q9UDT6 1046 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 FEM1BQ9UK73 627 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 COG6Q9Y2V7 657 aa13.95□□□□□ -0.18
CDK9-205ENST00000498339 ASTN1O14525 1302 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 MINDY4BA8MYZ0 360 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 CTAGE5O15320 804 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 DYNC1LI2O43237 492 aaPredicted RBP13.94□□□□□ -0.18
CDK9-205ENST00000498339 CHGBP05060 677 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 RASA1P20936 1047 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 TMEM31Q5JXX7 168 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 EEPD1Q7L9B9 569 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 LRRC47Q8N1G4 583 aaKnown RBP13.94□□□□□ -0.18
CDK9-205ENST00000498339 SLC43A3Q8NBI5 491 aa13.94□□□□□ -0.18
CDK9-205ENST00000498339 LRFN3Q9BTN0 628 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms