RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 C20orf194Q5TEA3 1177 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 ATF7IPQ6VMQ6 1270 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 FTSJ3Q8IY81 847 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 IFNL2Q8IZJ0 200 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 C8orf58Q8NAV2 365 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 TTC16Q8NEE8 873 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 ASAP3Q8TDY4 903 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 BCL2L13Q9BXK5 485 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 CHRDQ9H2X0 955 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 ZMIZ1Q9ULJ6 1067 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 NOB1Q9ULX3 412 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 PDE4DIPQ5VU43 2346 aa6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 WDR33Q9C0J8 1336 aaKnown RBP6.68□□□□□ -1.34
HMGXB4-208ENST00000498325 DOT1LQ8TEK3 1739 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 KRTAP9-7A8MTY7 169 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 RNMTO43148 476 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 DEFB115Q30KQ5 88 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 MPRIPQ6WCQ1 1025 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 TSPYL6Q8N831 410 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 PANK1Q8TE04 598 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 TMEM40Q8WWA1 233 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 ANP32EQ9BTT0 268 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 API5Q9BZZ5 524 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 SEMA6CQ9H3T2 930 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 RC3H2Q9HBD1 1191 aaKnown RBP6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 MIS18AQ9NYP9 233 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 CEMIPQ8WUJ3 1361 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 C4BP0C0L5 1744 aa6.67□□□□□ -1.34
HMGXB4-208ENST00000498325 PHKG2P15735 406 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 SSFA2P28290 1259 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 CHRNA5P30532 468 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 FXR1P51114 621 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 ELOAQ14241 798 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 MVPQ14764 893 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 C8orf34Q49A92 452 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 CCDC30Q5VVM6 783 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 GLIS3Q8NEA6 775 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 ZCRB1Q8TBF4 217 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 STK32AQ8WU08 396 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 EDEM1Q92611 657 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 MISP3Q96FF7 219 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 STK31Q9BXU1 1019 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 LGR6Q9HBX8 967 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 DDX19BQ9UMR2 479 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 PALLDQ8WX93 1383 aa6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 BRCA1P38398 1863 aaKnown RBP6.66□□□□□ -1.34
HMGXB4-208ENST00000498325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 A6NHS1 94 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 HOXB7P09629 217 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 EDN3P14138 238 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 TRIM27P14373 513 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 LMNB1P20700 586 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 BNIP3Q12983 259 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 OGFOD3Q6PK18 319 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 CENPQQ7L2Z9 268 aaPredicted RBP6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 LINC00116Q8NCU8 138 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 ACSS3Q9H6R3 686 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 FAM105AQ9NUU6 356 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 CCDC87Q9NVE4 849 aa6.65□□□□□ -1.34
HMGXB4-208ENST00000498325 ARFGEF1Q9Y6D6 1849 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 FUT4P22083 530 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 HP1BP3Q5SSJ5 553 aaPredicted RBP6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 ITPRIPQ8IWB1 547 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 GCC1Q96CN9 775 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 NRSN2Q9GZP1 204 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 C1GALT1Q9NS00 363 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 PTPRCP08575 1304 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 PCDH11XQ9BZA7 1347 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 PCDH11YQ9BZA8 1340 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 LTBP1Q14766 1721 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 SBF1O95248 1867 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 UBR3Q6ZT12 1888 aa6.64□□□□□ -1.35
HMGXB4-208ENST00000498325 TCERG1O14776 1098 aaKnown RBP6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 EREGO14944 169 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 MEGF6O75095 1541 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 RNASE1P07998 156 aaKnown RBP6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 RLBP1P12271 317 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 MAOBP27338 520 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 KRT24Q2M2I5 525 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 CYP27C1Q4G0S4 372 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 SEZ6L2Q6UXD5 910 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 TMEM57Q8N5G2 664 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 RWDD1Q9H446 243 aaPredicted RBP6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 SLC52A2Q9HAB3 445 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 RAD18Q9NS91 495 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 MBNL3Q9NUK0 354 aaKnown RBP6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 AP4E1Q9UPM8 1137 aa6.63□□□□□ -1.35
HMGXB4-208ENST00000498325 TAF1LQ8IZX4 1826 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 KDM3BQ7LBC6 1761 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 THSD7BQ9C0I4 1608 aa6.62□□□□□ -1.35
HMGXB4-208ENST00000498325 ERVV-2B6SEH9 535 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms