RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
NUDCD3-211ENST00000497978 RANBP2P49792 3224 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 TRIM6-TRIM34B2RNG4 842 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 FOXP2O15409 715 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 PLA2G6O60733 806 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 SNAI1O95863 264 aaPredicted RBP13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 TKFCQ3LXA3 575 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 RCSD1Q6JBY9 416 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 DEFB123Q8N688 67 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 TSEN34Q9BSV6 310 aaKnown RBP13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 ACAD9Q9H845 621 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 TOMM22Q9NS69 142 aa13.91□□□□□ -0.18
NUDCD3-211ENST00000497978 ORC4O43929 436 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 CHMP4CQ96CF2 233 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 ABHD16BQ9H3Z7 469 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 SPC25Q9HBM1 224 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 INCENPQ9NQS7 918 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 IL17RBQ9NRM6 502 aa13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.9□□□□□ -0.18
NUDCD3-211ENST00000497978 A0A0D9SFI3 127 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 A0A1W2PQ45 241 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 A0A1W2PQY0 241 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 POTEB2H3BUK9 544 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 NMT2O60551 498 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 DUSP11O75319 330 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 FGAP02671 866 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 NUBP1P53384 320 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 MFAP1P55081 439 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 CCDC96Q2M329 555 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 RRP12Q5JTH9 1297 aaKnown RBP13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 KCTD1Q719H9 257 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 PDLIM7Q9NR12 457 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 RNF146Q9NTX7 359 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 MTMR7Q9Y216 660 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 TACC3Q9Y6A5 838 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 SYNRGQ9UMZ2 1314 aa13.89□□□□□ -0.19
NUDCD3-211ENST00000497978 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ADAMTS4O75173 837 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 CLTBP09497 229 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 FGRP09769 529 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ALAS1P13196 640 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ACLYP53396 1101 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 TLE2Q04725 743 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ARMCX2Q7L311 632 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 BADQ92934 168 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 PRR12Q9ULL5 1215 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ZMYM6O95789 1325 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 CCDC171Q6TFL3 1326 aa13.88□□□□□ -0.19
NUDCD3-211ENST00000497978 ASB14A6NK59 587 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 DCDC2CA8MYV0 355 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 C6orf222P0C671 652 aaPredicted RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 TOP1P11387 765 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 PCP11498 1178 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 NOVP48745 357 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 CNTN2Q02246 1040 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 KCNA10Q16322 511 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 CCDC144BQ3MJ40 725 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 Q7L0L9 218 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 CCDC144CPQ8IYA2 1237 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 PCSK9Q8NBP7 692 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 A1CFQ9NQ94 594 aaKnown RBP13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 TCP11L1Q9NUJ3 509 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 LTBP2Q14767 1821 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 ZNF536O15090 1300 aa13.87□□□□□ -0.19
NUDCD3-211ENST00000497978 TRIM43BA6NCK2 446 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 RAG1P15918 1043 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 CST5P28325 142 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 MFSD6Q6ZSS7 791 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 ZNF589Q86UQ0 364 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 VTI1AQ96AJ9 217 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 TRIM43Q96BQ3 446 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 FGD4Q96M96 766 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 GLT1D1Q96MS3 346 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 RNF41Q9H4P4 317 aaPredicted RBP13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 TMEM39AQ9NV64 488 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 CCPG1Q9ULG6 757 aa13.86□□□□□ -0.19
NUDCD3-211ENST00000497978 MCM3APO60318 1980 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms