RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 SPATC1LQ9H0A9 340 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
ERCC8-208ENST00000497892 GABRQQ9UN88 632 aa13.21□□□□□ -0.29
ERCC8-208ENST00000497892 PLA2G6O60733 806 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 SNHG28P0DPA3 235 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 PDHBP11177 359 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 TMEM132BQ14DG7 1078 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 SLC9C1Q4G0N8 1177 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 CREB3L3Q68CJ9 461 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 CYB5R4Q7L1T6 521 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 GPR142Q7Z601 462 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 FAM160B2Q86V87 743 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
ERCC8-208ENST00000497892 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 RAET1EQ8TD07 263 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 SOCS4Q8WXH5 440 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 MOV10L1Q9BXT6 1211 aaKnown RBP13.2□□□□□ -0.3
ERCC8-208ENST00000497892 GJD2Q9UKL4 321 aa13.2□□□□□ -0.3
ERCC8-208ENST00000497892 BRCA2P51587 3418 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 PLS1Q14651 629 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 SEC23AQ15436 765 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 CCDC96Q2M329 555 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 RNF20Q5VTR2 975 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 KCTD1Q719H9 257 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 PLEKHH3Q7Z736 793 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
ERCC8-208ENST00000497892 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 MROH8Q9H579 483 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 KAT14Q9H8E8 782 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
ERCC8-208ENST00000497892 MTMR7Q9Y216 660 aa13.19□□□□□ -0.3
ERCC8-208ENST00000497892 REC8O95072 547 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 FDX1P10109 184 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 ERCC3P19447 782 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 GRK4P32298 578 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 OAZ1P54368 228 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 ANTXR2P58335 489 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 IKQ13123 557 aaPredicted RBP13.18□□□□□ -0.3
ERCC8-208ENST00000497892 MORN1Q5T089 497 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 IFIT1BQ5T764 474 aaKnown RBP13.18□□□□□ -0.3
ERCC8-208ENST00000497892 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 SH3TC2Q8TF17 1288 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 USP6NLQ92738 828 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 CHMP4CQ96CF2 233 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 ZNF333Q96JL9 665 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 NUDT12Q9BQG2 462 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 TEX13BQ9BXU2 312 aa13.18□□□□□ -0.3
ERCC8-208ENST00000497892 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
ERCC8-208ENST00000497892 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
ERCC8-208ENST00000497892 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 ADCY3O60266 1144 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 ZBED4O75132 1171 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 SLC25A27O95847 323 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 XRCC5P13010 732 aaKnown RBP13.17□□□□□ -0.3
ERCC8-208ENST00000497892 PTPREP23469 700 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 COPB2P35606 906 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 STAT3P40763 770 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 GRB14Q14449 540 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
ERCC8-208ENST00000497892 GPATCH4Q5T3I0 446 aaKnown RBP13.17□□□□□ -0.3
ERCC8-208ENST00000497892 WDR78Q5VTH9 848 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 NBPF11Q86T75 865 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 IVNS1ABPQ9Y6Y0 642 aa13.17□□□□□ -0.3
ERCC8-208ENST00000497892 ERICH2A1L162 156 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 SLC15A5A6NIM6 579 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
ERCC8-208ENST00000497892 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
ERCC8-208ENST00000497892 ELNP15502 786 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 MCM5P33992 734 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 RGS2P41220 211 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 MAP2K5Q13163 448 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
ERCC8-208ENST00000497892 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
ERCC8-208ENST00000497892 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 NCAPG2Q86XI2 1143 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 ABRAQ8N0Z2 381 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 APBA2Q99767 749 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 PLXNA1Q9UIW2 1896 aa13.16□□□□□ -0.3
ERCC8-208ENST00000497892 KIAA0100Q14667 2235 aaKnown RBP13.16□□□□□ -0.3
ERCC8-208ENST00000497892 ZNF536O15090 1300 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.3
ERCC8-208ENST00000497892 PRC1O43663 620 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 STRNO43815 780 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 HOXC6P09630 235 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 ZKSCAN1P17029 563 aaPredicted RBP13.15□□□□□ -0.3
ERCC8-208ENST00000497892 HSPA4P34932 840 aa13.15□□□□□ -0.3
ERCC8-208ENST00000497892 SLC16A2P36021 539 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms