RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 SNRPB2P08579 225 aaKnown RBP10.27□□□□□ -0.77
GARNL3-221ENST00000497703 FGFR1P11362 822 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 HOXA10P31260 410 aaPredicted RBP10.27□□□□□ -0.77
GARNL3-221ENST00000497703 IKZF1Q13422 519 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 SCUBE1Q8IWY4 988 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 FAM177A1Q8N128 213 aaPredicted RBP10.27□□□□□ -0.77
GARNL3-221ENST00000497703 SYNPOQ8N3V7 929 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 KCTD13Q8WZ19 329 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 LGR4Q9BXB1 951 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 NKX2-4Q9H2Z4 354 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 ATP13A1Q9HD20 1204 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 CYP26B1Q9NR63 512 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 SEMA3GQ9NS98 782 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 SLC5A6Q9Y289 635 aa10.27□□□□□ -0.77
GARNL3-221ENST00000497703 TRBV23-1A0A0A0MS06 115 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 ESYT3A0FGR9 886 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 PRODHO43272 600 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 VAMP4O75379 141 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 VAV1P15498 845 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 CTSKP43235 329 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 KSR1Q8IVT5 923 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 NLGN1Q8N2Q7 840 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 IER2Q9BTL4 223 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 CADPSQ9ULU8 1353 aa10.26□□□□□ -0.77
GARNL3-221ENST00000497703 APPP05067 770 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 PABPC1P11940 636 aaKnown RBP10.25□□□□□ -0.77
GARNL3-221ENST00000497703 SEPHS1P49903 392 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 EGR3Q06889 387 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 TCEA2Q15560 299 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 MSMPQ1L6U9 139 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 GAB4Q2WGN9 574 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 DHRS4Q9BTZ2 278 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 ANGEL1Q9UNK9 670 aaKnown RBP10.25□□□□□ -0.77
GARNL3-221ENST00000497703 BACE2Q9Y5Z0 518 aa10.25□□□□□ -0.77
GARNL3-221ENST00000497703 STXBP3O00186 592 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 TBX1O43435 398 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 GSTM1P09488 218 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 SUMO1P63165 101 aaKnown RBP10.24□□□□□ -0.77
GARNL3-221ENST00000497703 SQSTM1Q13501 440 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
GARNL3-221ENST00000497703 C16orf86Q6ZW13 317 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 USHBP1Q8N6Y0 703 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 CDADC1Q9BWV3 514 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 FOXP3Q9BZS1 431 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 PCDHA11Q9Y5I1 949 aa10.24□□□□□ -0.77
GARNL3-221ENST00000497703 EIF4G1Q04637 1599 aaKnown RBP10.23□□□□□ -0.77
GARNL3-221ENST00000497703 C2orf71A6NGG8 1288 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 FKTNO75072 461 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 ZNF205O95201 554 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 ECI1P42126 302 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 SCRN1Q12765 414 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 EEF1DP3Q658K8 133 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 NAT16Q8N8M0 369 aa10.23□□□□□ -0.77
GARNL3-221ENST00000497703 TRBV23OR9-2A0A075B6M9 112 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 WASH4PA8MWX3 477 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 RBAK-RBAKDNI3L0D1 243 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 AURKAO14965 403 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 RPL10P27635 214 aaKnown RBP10.22□□□□□ -0.77
GARNL3-221ENST00000497703 MAP4K2Q12851 820 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 VSIG10LQ86VR7 867 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 FCRL3Q96P31 734 aaPredicted RBP10.22□□□□□ -0.77
GARNL3-221ENST00000497703 SLC12A9Q9BXP2 914 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 KANSL2Q9H9L4 492 aa10.22□□□□□ -0.77
GARNL3-221ENST00000497703 MRPS23Q9Y3D9 190 aaKnown RBP10.22□□□□□ -0.77
GARNL3-221ENST00000497703 DNAJC25-GNG10A0A024R161 153 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 ASMTLO95671 621 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 L1CAMP32004 1257 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 GRIA2P42262 883 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 GFRA1P56159 465 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 RBM10P98175 930 aaKnown RBP10.21□□□□□ -0.77
GARNL3-221ENST00000497703 FAM209AQ5JX71 171 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 YOD1Q5VVQ6 348 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-221ENST00000497703 BCL7CQ8WUZ0 217 aaPredicted RBP10.21□□□□□ -0.77
GARNL3-221ENST00000497703 FEZ1Q99689 392 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 LMCD1Q9NZU5 365 aa10.21□□□□□ -0.77
GARNL3-221ENST00000497703 ERCC6Q03468 1493 aa10.21□□□□□ -0.78
GARNL3-221ENST00000497703 IFNGR1P15260 489 aa10.2□□□□□ -0.78
GARNL3-221ENST00000497703 SSTR4P31391 388 aa10.2□□□□□ -0.78
GARNL3-221ENST00000497703 PLEKHG4Q58EX7 1191 aa10.2□□□□□ -0.78
GARNL3-221ENST00000497703 RCSD1Q6JBY9 416 aa10.2□□□□□ -0.78
GARNL3-221ENST00000497703 WAPLQ7Z5K2 1190 aa10.2□□□□□ -0.78
GARNL3-221ENST00000497703 TBC1D8O95759 1140 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 ESR1P03372 595 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 PRNPP04156 253 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 SCG5P05408 212 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 EGFLAMQ63HQ2 1017 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 CYP2R1Q6VVX0 501 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 TMEM145Q8NBT3 493 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 FLCNQ8NFG4 579 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 CCDC120Q96HB5 630 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 CARS2Q9HA77 564 aaKnown RBP10.19□□□□□ -0.78
GARNL3-221ENST00000497703 AP5S1Q9NUS5 200 aa10.19□□□□□ -0.78
GARNL3-221ENST00000497703 ZP2Q05996 745 aa10.18□□□□□ -0.78
GARNL3-221ENST00000497703 BNIP3Q12983 259 aa10.18□□□□□ -0.78
GARNL3-221ENST00000497703 DUSP4Q13115 394 aa10.18□□□□□ -0.78
GARNL3-221ENST00000497703 FOXB2Q5VYV0 432 aa10.18□□□□□ -0.78
GARNL3-221ENST00000497703 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
GARNL3-221ENST00000497703 DTX1Q86Y01 620 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms