RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 APOBEC3FQ8IUX4 373 aaKnown RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 ZNF333Q96JL9 665 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 SPACA7Q96KW9 195 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 SCAF8Q9UPN6 1271 aaKnown RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 TRIM33Q9UPN9 1127 aa9.87□□□□□ -0.83
VPS45-210ENST00000497638 FNDC3AQ9Y2H6 1198 aaKnown RBP9.87□□□□□ -0.83
VPS45-210ENST00000497638 MYO3BQ8WXR4 1341 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 H0YGN5 161 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 WNT10BO00744 389 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 HOXD8P13378 290 aaPredicted RBP9.86□□□□□ -0.83
VPS45-210ENST00000497638 HSP90B1P14625 803 aaKnown RBP9.86□□□□□ -0.83
VPS45-210ENST00000497638 PPP2R1AP30153 589 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 FAM26DQ5JW98 314 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 TTC39BQ5VTQ0 682 aaPredicted RBP9.86□□□□□ -0.83
VPS45-210ENST00000497638 OTUD7BQ6GQQ9 843 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 SLC17A8Q8NDX2 589 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 CD99L2Q8TCZ2 262 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 FAM89AQ96GI7 184 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 ISCA1Q9BUE6 129 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 SRA1Q9HD15 236 aaKnown RBP9.86□□□□□ -0.83
VPS45-210ENST00000497638 BABAM1Q9NWV8 329 aa9.86□□□□□ -0.83
VPS45-210ENST00000497638 XDHP47989 1333 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 UNCXA6NJT0 531 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 IGF2BP3O00425 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
VPS45-210ENST00000497638 IRS4O14654 1257 aaPredicted RBP9.85□□□□□ -0.83
VPS45-210ENST00000497638 ATG7O95352 703 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 ZAP70P43403 619 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 HYAL2Q12891 473 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 ARHGEF6Q15052 776 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 TMEM164Q5U3C3 297 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 PRR23CQ6ZRP0 262 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 MAP4K3Q8IVH8 894 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 CACTIN-AS1Q8N1I8 211 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 PLBD2Q8NHP8 589 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 KRTAP4-8Q9BYQ9 185 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 ANGEL1Q9UNK9 670 aaKnown RBP9.85□□□□□ -0.83
VPS45-210ENST00000497638 PPME1Q9Y570 386 aa9.85□□□□□ -0.83
VPS45-210ENST00000497638 TNFRSF10BO14763 440 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
VPS45-210ENST00000497638 ATP2B4P23634 1241 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 SCNN1AP37088 669 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 SP3Q02447 781 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 CRHR2Q13324 411 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 PRKG1Q13976 671 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 SETDB1Q15047 1291 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 OR13H1Q8NG92 308 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 GPR152Q8TDT2 470 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 WNK4Q96J92 1243 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 MUC3BQ9H195 1237 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 MED23Q9ULK4 1368 aa9.84□□□□□ -0.83
VPS45-210ENST00000497638 COL6A3P12111 3177 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 MAPK8IP3Q9UPT6 1336 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 F8W735 103 aaPredicted RBP9.83□□□□□ -0.84
VPS45-210ENST00000497638 SASH1O94885 1247 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 TRIM26Q12899 539 aaPredicted RBP9.83□□□□□ -0.84
VPS45-210ENST00000497638 SLC4A8Q2Y0W8 1093 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 CCDC152Q4G0S7 254 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 DACT2Q5SW24 774 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 STRIP1Q5VSL9 837 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 CEP135Q66GS9 1140 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 ZNF428Q96B54 188 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 PLEKHF1Q96S99 279 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 PNNQ9H307 717 aaKnown RBP9.83□□□□□ -0.84
VPS45-210ENST00000497638 SEC31BQ9NQW1 1179 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 STIM2Q9P246 746 aa9.83□□□□□ -0.84
VPS45-210ENST00000497638 ZNF646O15015 1829 aaPredicted RBP9.82□□□□□ -0.84
VPS45-210ENST00000497638 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
VPS45-210ENST00000497638 DZIP1LQ8IYY4 767 aaKnown RBP9.82□□□□□ -0.84
VPS45-210ENST00000497638 LACRTQ9GZZ8 138 aa9.82□□□□□ -0.84
VPS45-210ENST00000497638 PPP2R3BQ9Y5P8 575 aa9.82□□□□□ -0.84
VPS45-210ENST00000497638 LINC01387J3KSC0 135 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 GLB1P16278 677 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 ATP11AP98196 1134 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 ANKRD18AQ8IVF6 992 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 AGGF1Q8N302 714 aaeCLIP9.81□□□□□ -0.84
VPS45-210ENST00000497638 ZBTB38Q8NAP3 1195 aaPredicted RBP9.81□□□□□ -0.84
VPS45-210ENST00000497638 CLP1Q92989 425 aaKnown RBP9.81□□□□□ -0.84
VPS45-210ENST00000497638 ZBED3Q96IU2 234 aaPredicted RBP9.81□□□□□ -0.84
VPS45-210ENST00000497638 CLMNQ96JQ2 1002 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 CHPF2Q9P2E5 772 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 RNF112Q9ULX5 631 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 PTCH2Q9Y6C5 1203 aa9.81□□□□□ -0.84
VPS45-210ENST00000497638 SSC5DA1L4H1 1573 aa9.8□□□□□ -0.84
VPS45-210ENST00000497638 HOXB7P09629 217 aa9.8□□□□□ -0.84
VPS45-210ENST00000497638 LMOD3Q0VAK6 560 aa9.8□□□□□ -0.84
VPS45-210ENST00000497638 COA1Q9GZY4 146 aa9.8□□□□□ -0.84
VPS45-210ENST00000497638 DEFB129Q9H1M3 183 aa9.8□□□□□ -0.84
VPS45-210ENST00000497638 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
VPS45-210ENST00000497638 DBF4Q9UBU7 674 aaPredicted RBP9.8□□□□□ -0.84
VPS45-210ENST00000497638 A0A1W2PPC1 479 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 ZBTB39O15060 712 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 PDE8AO60658 829 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 CDC25BP30305 580 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 CAP1Q01518 475 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 SUPT20HL1Q3ZLR7 823 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 TXNDC11Q6PKC3 985 aa9.79□□□□□ -0.84
VPS45-210ENST00000497638 CCDC97Q96F63 343 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms