RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 RIC8AQ9NPQ8 531 aa13.93□□□□□ -0.18
HPS1-213ENST00000497527 PRR12Q9ULL5 1215 aa13.93□□□□□ -0.18
HPS1-213ENST00000497527 PTPRFP10586 1907 aa13.93□□□□□ -0.18
HPS1-213ENST00000497527 M0R2N6 131 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 USP2O75604 605 aaPredicted RBP13.92□□□□□ -0.18
HPS1-213ENST00000497527 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
HPS1-213ENST00000497527 PTPRAP18433 802 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS1-213ENST00000497527 PTPAQ15257 358 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 EAPPQ56P03 285 aaPredicted RBP13.92□□□□□ -0.18
HPS1-213ENST00000497527 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 CCDC183Q5T5S1 534 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 SPICE1Q8N0Z3 855 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 RBM46Q8TBY0 533 aaKnown RBP13.92□□□□□ -0.18
HPS1-213ENST00000497527 CDCA5Q96FF9 252 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 C12orf42Q96LP6 360 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 DDX19AQ9NUU7 478 aaKnown RBP13.92□□□□□ -0.18
HPS1-213ENST00000497527 PCDHA6Q9UN73 950 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 PCDHA8Q9Y5H6 950 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 PCDHA1Q9Y5I3 950 aa13.92□□□□□ -0.18
HPS1-213ENST00000497527 RBBP6Q7Z6E9 1792 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 ADM5C9JUS6 153 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 CUTAO60888 179 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 TOB1P50616 345 aaPredicted RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 BACE1P56817 501 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 SPP2Q13103 211 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 GSE1Q14687 1217 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 ZYXQ15942 572 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 PRAMEF18Q5VWM3 479 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 KRI1Q8N9T8 703 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 PRPF38AQ8NAV1 312 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 COA7Q96BR5 231 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 NAP1L4Q99733 375 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
HPS1-213ENST00000497527 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
HPS1-213ENST00000497527 TMOD4Q9NZQ9 345 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 PCDHA7Q9UN72 937 aa13.91□□□□□ -0.18
HPS1-213ENST00000497527 SRCAPQ6ZRS2 3230 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 UNCXA6NJT0 531 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 LAD1O00515 517 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 MTMR2Q13614 643 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 MAP3K11Q16584 847 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 CCAR1Q8IX12 1150 aaKnown RBP13.9□□□□□ -0.18
HPS1-213ENST00000497527 ZKSCAN4Q969J2 545 aaPredicted RBP13.9□□□□□ -0.18
HPS1-213ENST00000497527 FERMT2Q96AC1 680 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 GLIS2Q9BZE0 524 aaPredicted RBP13.9□□□□□ -0.18
HPS1-213ENST00000497527 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
HPS1-213ENST00000497527 PSTPIP2Q9H939 334 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 ZHX2Q9Y6X8 837 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 MYH7BA7E2Y1 1941 aa13.9□□□□□ -0.18
HPS1-213ENST00000497527 ABCB11O95342 1321 aa13.9□□□□□ -0.19
HPS1-213ENST00000497527 PPP1R11O60927 126 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 ATP2B1P20020 1258 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 CMA1P23946 247 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 FAM160A1Q05DH4 1040 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 NEK8Q86SG6 692 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 FSIP1Q8NA03 581 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 KIFC2Q96AC6 838 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 NUP62CLQ9H1M0 184 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 TMEM63CQ9P1W3 806 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 MRPL11Q9Y3B7 192 aaKnown RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 CTDP1Q9Y5B0 961 aaPredicted RBP13.89□□□□□ -0.19
HPS1-213ENST00000497527 PCDHB6Q9Y5E3 794 aa13.89□□□□□ -0.19
HPS1-213ENST00000497527 LOC285556D6RIA3 1793 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 CTAGE5O15320 804 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 KINO60870 393 aaKnown RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 VCAM1P19320 739 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 PTPREP23469 700 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 ZNF445P59923 1031 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 PPATQ06203 517 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 VGLL4Q14135 290 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 SH3D19Q5HYK7 790 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 KIAA1755Q5JYT7 1200 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 ARL6IP4Q66PJ3 421 aaKnown RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 RASGRP4Q8TDF6 673 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 EMILIN3Q9NT22 766 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 FAM13BQ9NYF5 915 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 SRPRBQ9Y5M8 271 aaKnown RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 SNCAIPQ9Y6H5 919 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 MYPNQ86TC9 1320 aa13.88□□□□□ -0.19
HPS1-213ENST00000497527 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
HPS1-213ENST00000497527 FAM205CA6NFA0 338 aa13.87□□□□□ -0.19
HPS1-213ENST00000497527 POTECB2RU33 542 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms