RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 RAB11FIP4Q86YS3 637 aa22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 KIFC2Q96AC6 838 aa22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 CWC22Q9HCG8 908 aaKnown RBP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 A0A0G2JMZ2 1700 aa22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 SLC16A2P36021 539 aa22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 NOM1Q5C9Z4 860 aaKnown RBP22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 PPP1R18Q6NYC8 613 aa22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 AMNQ9BXJ7 453 aa22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 V9GY48 417 aaPredicted RBP22.83■■□□□ 1.25
SCAMP3-209ENST00000497470 ADGRA2Q96PE1 1338 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 PTPDC1A2A3K4 754 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 SCG2P13521 617 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 PKN1Q16512 942 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 CDC37Q16543 378 aaPredicted RBP22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 CCDC12Q8WUD4 166 aaPredicted RBP22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ATG4CQ96DT6 458 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 GLT8D2Q9H1C3 349 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ZFYVE28Q9HCC9 887 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 SAGE1Q9NXZ1 904 aa22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ORC3Q9UBD5 711 aaPredicted RBP22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ZNF214Q9UL59 606 aaPredicted RBP22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ISY1Q9ULR0 285 aaKnown RBP22.82■■□□□ 1.24
SCAMP3-209ENST00000497470 ESYT2A0FGR8 921 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 TLR2O60603 784 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 SLC25A27O95847 323 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 FDPSP14324 419 aaKnown RBP22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 XBP1P17861 261 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 PDCP20941 246 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 FAM110CQ1W6H9 321 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 QRICH1Q2TAL8 776 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 FBXO11Q86XK2 927 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 SHCBP1Q8NEM2 672 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 PIGSQ96S52 555 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 SLC26A6Q9BXS9 759 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 TEX13BQ9BXU2 312 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 MAP3K20Q9NYL2 800 aaKnown RBP22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 SMC3Q9UQE7 1217 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 CTDP1Q9Y5B0 961 aaPredicted RBP22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 ZNF536O15090 1300 aa22.81■■□□□ 1.24
SCAMP3-209ENST00000497470 TAF1CQ15572 869 aaPredicted RBP22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 GALNT17Q6IS24 598 aa22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 RIOX2Q8IUF8 465 aa22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 SMCR8Q8TEV9 937 aaPredicted RBP22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 BARHL2Q9NY43 387 aa22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 RBPJLQ9UBG7 517 aa22.8■■□□□ 1.24
SCAMP3-209ENST00000497470 CCNA1P78396 465 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 GHRHRQ02643 423 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 MAP2K1Q02750 393 aaPredicted RBP22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 PHKBQ93100 1093 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 ZIC5Q96T25 663 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 FBXO40Q9UH90 709 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 ABCB11O95342 1321 aa22.79■■□□□ 1.24
SCAMP3-209ENST00000497470 AOC2O75106 756 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 HSP90AA1P07900 732 aaKnown RBP22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 BCRP11274 1271 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 STAT3P40763 770 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 TMEM132BQ14DG7 1078 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 MCTP2Q6DN12 878 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 C17orf99Q6UX52 265 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 CMTR1Q8N1G2 835 aaKnown RBP22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 CCDC82Q8N4S0 544 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 DNAJC5GQ8N7S2 189 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 CHST13Q8NET6 341 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 GPRC5AQ8NFJ5 357 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 CCDC148Q8NFR7 591 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 CPVLQ9H3G5 476 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 VAT1LQ9HCJ6 419 aa22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 MRPL11Q9Y3B7 192 aaKnown RBP22.78■■□□□ 1.24
SCAMP3-209ENST00000497470 POTEEQ6S8J3 1075 aa22.77■■□□□ 1.24
SCAMP3-209ENST00000497470 FAM184AQ8NB25 1140 aa22.77■■□□□ 1.24
SCAMP3-209ENST00000497470 SPATC1LQ9H0A9 340 aa22.77■■□□□ 1.24
SCAMP3-209ENST00000497470 JAK2O60674 1132 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 CNMDO75829 334 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 CYP2C8P10632 490 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 ERVK-9P63128 1117 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 ERVK-24P63145 666 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 ZMYND12Q9H0C1 365 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 MROH8Q9H579 483 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 BTBD7Q9P203 1132 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 PCDHA1Q9Y5I3 950 aa22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 BAZ2BQ9UIF8 2168 aaKnown RBP22.76■■□□□ 1.23
SCAMP3-209ENST00000497470 CALML3P27482 149 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 GJB2P29033 226 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 HOMER1Q86YM7 354 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 MCF2L2Q86YR7 1114 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 ALG1Q9BT22 464 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 CCPG1Q9ULG6 757 aa22.75■■□□□ 1.23
SCAMP3-209ENST00000497470 STXBP3O00186 592 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 PPP1R11O60927 126 aaPredicted RBP22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 GNA11P29992 359 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 HTRA3P83110 453 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 GRM1Q13255 1194 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 WWC2Q6AWC2 1192 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 ABRAQ8N0Z2 381 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 DAGLBQ8NCG7 672 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 FBXO18Q8NFZ0 1043 aa22.74■■□□□ 1.23
SCAMP3-209ENST00000497470 IPO9Q96P70 1041 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms