RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 PIBF1Q8WXW3 757 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 MS4A4AQ96JQ5 239 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 FBXO28Q9NVF7 368 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 PRR12Q9ULL5 1215 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 ISY1Q9ULR0 285 aaKnown RBP11.36□□□□□ -0.59
TCTN3-206ENST00000497399 MTMR6Q9Y217 621 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 MYH15Q9Y2K3 1946 aa11.36□□□□□ -0.59
TCTN3-206ENST00000497399 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 MANSC4A6NHS7 340 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 PPP1R11O60927 126 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 BRD1O95696 1058 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 ZBTB48P10074 688 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 SCG2P13521 617 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 PDCP20941 246 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 STAT2P52630 851 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 INHBEP58166 350 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 GUCY1B3Q02153 619 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 SREBF2Q12772 1141 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 OTOP1Q7RTM1 612 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 FAM160B2Q86V87 743 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 HOMER1Q86YM7 354 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 WASF1Q92558 559 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 C8orf76Q96K31 380 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 RBM27Q9P2N5 1060 aaKnown RBP11.35□□□□□ -0.59
TCTN3-206ENST00000497399 FEM1BQ9UK73 627 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 KIF3AQ9Y496 699 aa11.35□□□□□ -0.59
TCTN3-206ENST00000497399 KIAA0100Q14667 2235 aaKnown RBP11.34□□□□□ -0.59
TCTN3-206ENST00000497399 PNMA6FA0A0J9YX94 578 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 SNAP25P60880 206 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 NUCB2P80303 420 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 QRICH1Q2TAL8 776 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 TREML2Q5T2D2 321 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 PRPF38BQ5VTL8 546 aaKnown RBP11.34□□□□□ -0.59
TCTN3-206ENST00000497399 KRT40Q6A162 431 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
TCTN3-206ENST00000497399 RGS22Q8NE09 1264 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 CHURC1Q8WUH1 139 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 GPKOWQ92917 476 aaPredicted RBP eCLIP11.34□□□□□ -0.59
TCTN3-206ENST00000497399 TMOD4Q9NZQ9 345 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 VPS54Q9P1Q0 977 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 TCHHQ07283 1943 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 A0A0G2JMZ2 1700 aa11.34□□□□□ -0.59
TCTN3-206ENST00000497399 VPS37CA5D8V6 355 aaPredicted RBP11.33□□□□□ -0.6
TCTN3-206ENST00000497399 STXBP3O00186 592 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 ZBTB5O15062 677 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 ZSCAN22P10073 491 aaPredicted RBP11.33□□□□□ -0.6
TCTN3-206ENST00000497399 IKQ13123 557 aaPredicted RBP11.33□□□□□ -0.6
TCTN3-206ENST00000497399 CRHR2Q13324 411 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 NPY5RQ15761 445 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
TCTN3-206ENST00000497399 GPAT2Q6NUI2 795 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 GADL1Q6ZQY3 521 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 SLF1Q9BQI6 1058 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 TANGO6Q9C0B7 1094 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 RANBP17Q9H2T7 1088 aaKnown RBP11.33□□□□□ -0.6
TCTN3-206ENST00000497399 PPP1R9AQ9ULJ8 1098 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 KCNJ14Q9UNX9 436 aa11.33□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 H3BQV1 296 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 FLOT1O75955 427 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 ALDH1A1P00352 501 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 F13A1P00488 732 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 DSG3P32926 999 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 FOXD4L5Q5VV16 416 aaPredicted RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 HEATR3Q7Z4Q2 680 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 PRPF38AQ8NAV1 312 aaKnown RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 FOXD4L4Q8WXT5 416 aaPredicted RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 COA7Q96BR5 231 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 PHF20Q9BVI0 1012 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 SH3GLB2Q9NR46 395 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 PCDH10Q9P2E7 1040 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
TCTN3-206ENST00000497399 ADAMTS5Q9UNA0 930 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 TRIM17Q9Y577 477 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 ZNF536O15090 1300 aa11.32□□□□□ -0.6
TCTN3-206ENST00000497399 KIF28PB7ZC32 967 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
TCTN3-206ENST00000497399 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms