RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 ATF7IPQ6VMQ6 1270 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 MIGA2Q7L4E1 593 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 ADGRA1Q86SQ6 560 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 FAM151AQ8WW52 585 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 ARMC5Q96C12 935 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 SHISA4Q96DD7 197 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 IDI2Q9BXS1 227 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 ZMYND15Q9H091 742 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 TSPAN10Q9H1Z9 355 aaPredicted RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 C1orf115Q9H7X2 142 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 DNAJC18Q9H819 358 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 TLR7Q9NYK1 1049 aaKnown RBP6.84□□□□□ -1.31
UBE3C-208ENST00000497368 KCNH4Q9UQ05 1017 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 PTPN22Q9Y2R2 807 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 TRIM17Q9Y577 477 aa6.84□□□□□ -1.31
UBE3C-208ENST00000497368 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 FAM196BA6NMK8 535 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 SRGAP3O43295 1099 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 RGS3P49796 1198 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 JAG1P78504 1218 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 MECOMQ03112 1051 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 SRSF11Q05519 484 aaKnown RBP6.83□□□□□ -1.32
UBE3C-208ENST00000497368 SH3PXD2AQ5TCZ1 1133 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 VPS37DQ86XT2 251 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 SVOPQ8N4V2 548 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 WDR66Q8TBY9 1149 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 SSH3Q8TE77 659 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 NSUN4Q96CB9 384 aaKnown RBP6.83□□□□□ -1.32
UBE3C-208ENST00000497368 ZNF333Q96JL9 665 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 CRISPLD1Q9H336 500 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 RBM19Q9Y4C8 960 aaKnown RBP6.83□□□□□ -1.32
UBE3C-208ENST00000497368 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
UBE3C-208ENST00000497368 GPR75-ASB3A0A0A6YYF3 556 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L15C9J2P7 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L10C9JJH3 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L13C9JLJ4 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L12C9JPN9 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L11C9JVI0 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L21D6R901 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L18D6R9N7 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L22D6RA61 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L17D6RBQ6 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L19D6RCP7 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L20D6RJB6 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 LGR5O75473 907 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 LDHBP07195 334 aaKnown RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 BCRP11274 1271 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 MX2P20592 715 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 RFX1P22670 979 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 NOS2P35228 1153 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 BTDP43251 543 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 TNNI2P48788 182 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 INHBEP58166 350 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 USP17L24Q0WX57 530 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 TEAD4Q15561 434 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 PKN2Q16513 984 aaKnown RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ARSJQ5FYB0 599 aaPredicted RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 LYPD4Q6UWN0 246 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ERO1BQ86YB8 467 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 C1orf216Q8TAB5 229 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ABHD17AQ96GS6 310 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 DBNDD2Q9BQY9 259 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ZNF341Q9BYN7 854 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 VRTNQ9H8Y1 702 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 DBNLQ9UJU6 430 aaKnown RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 DENND2AQ9ULE3 1009 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ZNF232Q9UNY5 417 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 COL11A1P12107 1806 aaPredicted RBP6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ZNF236Q9UL36 1845 aa6.82□□□□□ -1.32
UBE3C-208ENST00000497368 ZBED9Q6R2W3 1325 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 CEP290O15078 2479 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 A0A0G2JLL6 359 aaPredicted RBP6.81□□□□□ -1.32
UBE3C-208ENST00000497368 A0A1W2PNR3 127 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 M0R2N6 131 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 BNIP3LO60238 219 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 TLR2O60603 784 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 ENTPD3O75355 529 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 GTF2A2P52657 109 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 SEC13P55735 322 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 LACTBP83111 547 aaPredicted RBP6.81□□□□□ -1.32
UBE3C-208ENST00000497368 SP3Q02447 781 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 PPATQ06203 517 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 DPYDQ12882 1025 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 PTK7Q13308 1070 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 TNNI3KQ59H18 835 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
UBE3C-208ENST00000497368 ERO1AQ96HE7 468 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 ZCCHC17Q9NP64 241 aaKnown RBP6.81□□□□□ -1.32
UBE3C-208ENST00000497368 PIH1D3Q9NQM4 214 aaKnown RBP6.81□□□□□ -1.32
UBE3C-208ENST00000497368 USP40Q9NVE5 1235 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 ZDHHC3Q9NYG2 299 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 CSADQ9Y600 493 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 FPGT-TNNI3KV9GXZ4 949 aa6.81□□□□□ -1.32
UBE3C-208ENST00000497368 SERTM1A2A2V5 107 aa6.8□□□□□ -1.32
UBE3C-208ENST00000497368 FRAT2O75474 233 aaPredicted RBP6.8□□□□□ -1.32
UBE3C-208ENST00000497368 GNAI2P04899 355 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms