RNA–Protein interactions for RNA: ENST00000497232.5

CCDC142-209, Transcript of coiled-coil domain containing 142, humanhuman

TSL 3

Gene CCDC142, Length 671 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-209ENST00000497232 IFNL1Q8IU54 200 aa12.67□□□□□ -0.38
CCDC142-209ENST00000497232 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
CCDC142-209ENST00000497232 SLC26A6Q9BXS9 759 aa12.67□□□□□ -0.38
CCDC142-209ENST00000497232 TANGO6Q9C0B7 1094 aa12.67□□□□□ -0.38
CCDC142-209ENST00000497232 TXNRD2Q9NNW7 524 aa12.67□□□□□ -0.38
CCDC142-209ENST00000497232 RBPJLQ9UBG7 517 aa12.67□□□□□ -0.38
CCDC142-209ENST00000497232 MYH6P13533 1939 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 CPLX1O14810 134 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 ADAMTS3O15072 1205 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 CDKL5O76039 1030 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 DEXIO95424 95 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 CYP2C8P10632 490 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 GJB2P29033 226 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 HERVK_113P62684 666 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 CDC37Q16543 378 aaPredicted RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 WWC2Q6AWC2 1192 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 RGS22Q8NE09 1264 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 KIFC2Q96AC6 838 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 DDX11Q96FC9 970 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 VAT1LQ9HCJ6 419 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 GJB4Q9NTQ9 266 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 BTBD7Q9P203 1132 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.66□□□□□ -0.38
CCDC142-209ENST00000497232 CEP350Q5VT06 3117 aa12.66□□□□□ -0.38
CCDC142-209ENST00000497232 STXBP3O00186 592 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 PEX10O60683 326 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 FDX1P10109 184 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 SCG2P13521 617 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
CCDC142-209ENST00000497232 OAZ1P54368 228 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 GHRHRQ02643 423 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
CCDC142-209ENST00000497232 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
CCDC142-209ENST00000497232 CFHR5Q9BXR6 569 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 R3HDMLQ9H3Y0 253 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
CCDC142-209ENST00000497232 PCNTO95613 3336 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 M0R2N6 131 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 ICAM1P05362 532 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 MAP2K2P36507 400 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 PABPC4Q13310 644 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC142-209ENST00000497232 Q3C1V9 767 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CCDC142-209ENST00000497232 AGBL1Q96MI9 1066 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 RBM27Q9P2N5 1060 aaKnown RBP12.64□□□□□ -0.39
CCDC142-209ENST00000497232 SMC3Q9UQE7 1217 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 ZDHHC9Q9Y397 364 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
CCDC142-209ENST00000497232 BCRP11274 1271 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 OSBPP22059 807 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 PKP1Q13835 747 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC142-209ENST00000497232 HOMER1Q86YM7 354 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
CCDC142-209ENST00000497232 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 FAM177A1Q8N128 213 aaPredicted RBP12.63□□□□□ -0.39
CCDC142-209ENST00000497232 MB21D1Q8N884 522 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 FBXO18Q8NFZ0 1043 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 COA7Q96BR5 231 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 ALG1Q9BT22 464 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 PHF20Q9BVI0 1012 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 CWC22Q9HCG8 908 aaKnown RBP12.63□□□□□ -0.39
CCDC142-209ENST00000497232 SH3GLB2Q9NR46 395 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
CCDC142-209ENST00000497232 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 hCG_1984214I3L0E3 225 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 SYT1P21579 422 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 IRX3P78415 501 aaPredicted RBP12.62□□□□□ -0.39
CCDC142-209ENST00000497232 OTUD7BQ6GQQ9 843 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 C17orf99Q6UX52 265 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 FBXO11Q86XK2 927 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 ZNF713Q8N859 430 aaPredicted RBP12.62□□□□□ -0.39
CCDC142-209ENST00000497232 SPRYD3Q8NCJ5 442 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 TNFRSF25Q93038 417 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 AMNQ9BXJ7 453 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 RAVER2Q9HCJ3 691 aaKnown RBP12.62□□□□□ -0.39
CCDC142-209ENST00000497232 VPS54Q9P1Q0 977 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
CCDC142-209ENST00000497232 CA12O43570 354 aa12.61□□□□□ -0.39
CCDC142-209ENST00000497232 EDIL3O43854 480 aa12.61□□□□□ -0.39
CCDC142-209ENST00000497232 TLR2O60603 784 aa12.61□□□□□ -0.39
CCDC142-209ENST00000497232 ZBED4O75132 1171 aa12.61□□□□□ -0.39
CCDC142-209ENST00000497232 CLK2P49760 499 aaKnown RBP12.61□□□□□ -0.39
CCDC142-209ENST00000497232 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
CCDC142-209ENST00000497232 MUM1L1Q5H9M0 696 aa12.61□□□□□ -0.39
CCDC142-209ENST00000497232 KRT40Q6A162 431 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms