RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 NOD2Q9HC29 1040 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 RANBP6O60518 1105 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 BUB1BO60566 1050 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 SNUPNO95149 360 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 IFNAR1P17181 557 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PRPHP41219 470 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 ELF3P78545 371 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PDIA6Q15084 440 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 AMOTQ4VCS5 1084 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 ZNF507Q8TCN5 953 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PIK3R5Q8WYR1 880 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 ITFG2Q969R8 447 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 SPDL1Q96EA4 605 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 SEC16BQ96JE7 1060 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 SPAG5Q96R06 1193 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 MOV10L1Q9BXT6 1211 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 NHEJ1Q9H9Q4 299 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 C15orf41Q9Y2V0 281 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 RIPOR2Q9Y4F9 1068 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 AFDNP55196 1824 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 NUTM2BA6NNL0 878 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 NUTM2EB1AL46 878 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 BTBD18B2RXH4 712 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 RNMTO43148 476 aaKnown RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 APPBP2Q92624 585 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 PLCB1Q9NQ66 1216 aa14.43□□□□□ -0.1
VEGFA-215ENST00000497139 CORO1CQ9ULV4 474 aaPredicted RBP14.43□□□□□ -0.1
VEGFA-215ENST00000497139 CFAP73A6NFT4 308 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 HSPA9P38646 679 aaKnown RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 AFMP43652 599 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 DNM2P50570 870 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 ZBED6P86452 979 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 SPA17Q15506 151 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 GKAP1Q5VSY0 366 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 CCT6BQ92526 530 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 SH2D4AQ9H788 454 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 SLC12A6Q9UHW9 1150 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 TRPC6Q9Y210 931 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 A0A1W2PQJ5 194 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 ERICH2A1L162 156 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 RCCD1A6NED2 376 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 IL15P40933 162 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 LIFRP42702 1097 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 ZNF658Q5TYW1 1059 aaPredicted RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 RRAGBQ5VZM2 374 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 NOC3LQ8WTT2 800 aaKnown RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 TTYH3Q9C0H2 523 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 CPSF2Q9P2I0 782 aaKnown RBP14.42□□□□□ -0.1
VEGFA-215ENST00000497139 SWAP70Q9UH65 585 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 LEMD3Q9Y2U8 911 aa14.42□□□□□ -0.1
VEGFA-215ENST00000497139 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 NLRP6P59044 892 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 SLC7A5Q01650 507 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 CDC37Q16543 378 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 FIGNQ5HY92 759 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 CAPRIN2Q6IMN6 1127 aaKnown RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 BZW1Q7L1Q6 419 aaKnown RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 TRIM22Q8IYM9 498 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 NELFBQ8WX92 580 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 HVCN1Q96D96 273 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 NEUROD6Q96NK8 337 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 ANKRD27Q96NW4 1050 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 THAP9Q9H5L6 903 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 ADAMTS7Q9UKP4 1686 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 GCOM1H8Y6P7 765 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 ECM2O94769 699 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.19e-13■■□□□ 11.9
VEGFA-215ENST00000497139 PARP1P09874 1014 aaKnown RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 MYZAPP0CAP1 466 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 PDCD2Q16342 344 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 CFAP221Q4G0U5 840 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 AGBL2Q5U5Z8 902 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 ZNF530Q6P9A1 599 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 NSMCE1Q8WV22 266 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 MYD88Q99836 296 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 SLC26A6Q9BXS9 759 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 KIF9Q9HAQ2 790 aa14.41□□□□□ -0.1
VEGFA-215ENST00000497139 PPANQ9NQ55 473 aaKnown RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
VEGFA-215ENST00000497139 MYH13Q9UKX3 1938 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 MACROD2A1Z1Q3 448 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 IRF6O14896 467 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 PPIP5K2O43314 1243 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 GTPBP6O43824 516 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-215ENST00000497139 SMNDC1O75940 238 aaKnown RBP eCLIP14.4□□□□□ -0.14e-7■■□□□ 12.8
VEGFA-215ENST00000497139 SRGNP10124 158 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 AIMP1Q12904 312 aaKnown RBP14.4□□□□□ -0.1
VEGFA-215ENST00000497139 APLFQ8IW19 511 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-215ENST00000497139 SMYD4Q8IYR2 804 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-215ENST00000497139 SOS2Q07890 1332 aaPredicted RBP14.4□□□□□ -0.1
VEGFA-215ENST00000497139 LAMB4A4D0S4 1761 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 LTN1O94822 1766 aa14.4□□□□□ -0.1
VEGFA-215ENST00000497139 MYH7P12883 1935 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms