RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 AKAP17AQ02040 695 aaKnown RBP16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 SREBF2Q12772 1141 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 QRICH1Q2TAL8 776 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 SAMD1Q6SPF0 538 aaPredicted RBP16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 LBX2Q6XYB7 198 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 P2RX7Q99572 595 aaKnown RBP16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 SLC38A10Q9HBR0 1119 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 ZCCHC17Q9NP64 241 aaKnown RBP16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 PNMA3Q9UL41 463 aa16.14■□□□□ 0.18
ATPAF2-208ENST00000496852 MGAMO43451 1857 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 AOC2O75106 756 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 SCG2P13521 617 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 HSPA6P17066 643 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 HERVK_113P62684 666 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 POTEEQ6S8J3 1075 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 IFNL1Q8IU54 200 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 REPS2Q8NFH8 660 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 ZNF536O15090 1300 aa16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 WDR33Q9C0J8 1336 aaKnown RBP16.14■□□□□ 0.17
ATPAF2-208ENST00000496852 VEGFBP49765 207 aa16.13■□□□□ 0.17
ATPAF2-208ENST00000496852 AIFM3Q96NN9 605 aa16.13■□□□□ 0.17
ATPAF2-208ENST00000496852 PLXNB2O15031 1838 aa16.13■□□□□ 0.17
ATPAF2-208ENST00000496852 ZBED4O75132 1171 aa16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 CYP2C8P10632 490 aa16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 REM2Q8IYK8 340 aaPredicted RBP16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 WASF1Q92558 559 aa16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 LCTP09848 1927 aa16.12■□□□□ 0.17
ATPAF2-208ENST00000496852 hCG_1984214I3L0E3 225 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 ATP2A1O14983 1001 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 ZNF713Q8N859 430 aaPredicted RBP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 MB21D1Q8N884 522 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 SHISA4Q96DD7 197 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 ALG1Q9BT22 464 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 AMNQ9BXJ7 453 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 ZNF214Q9UL59 606 aaPredicted RBP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 KIF3AQ9Y496 699 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 ICAM1P05362 532 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 MAP2K2P36507 400 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 OAZ1P54368 228 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 TMEM132BQ14DG7 1078 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 TYW1BQ6NUM6 668 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 FBXO11Q86XK2 927 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 GTF3C2Q8WUA4 911 aaPredicted RBP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 PARK7Q99497 189 aaKnown RBP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 BARHL2Q9NY43 387 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 BTBD7Q9P203 1132 aa16.11■□□□□ 0.17
ATPAF2-208ENST00000496852 PLXNA1Q9UIW2 1896 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 ADGRA2Q96PE1 1338 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 STXBP3O00186 592 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 CNMDO75829 334 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 HEATR3Q7Z4Q2 680 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 CPXCR1Q8N123 301 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 SMCR8Q8TEV9 937 aaPredicted RBP16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 COA7Q96BR5 231 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 AGBL1Q96MI9 1066 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 RAVER2Q9HCJ3 691 aaKnown RBP16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 GJB4Q9NTQ9 266 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 VPS54Q9P1Q0 977 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 RBPJLQ9UBG7 517 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 MYH7BA7E2Y1 1941 aa16.1■□□□□ 0.17
ATPAF2-208ENST00000496852 DDIT3P35638 169 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 TAF1CQ15572 869 aaPredicted RBP16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 TXNRD2Q9NNW7 524 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 PNMA2Q9UL42 364 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 RABGAP1Q9Y3P9 1069 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 CTDP1Q9Y5B0 961 aaPredicted RBP16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 PCDHA1Q9Y5I3 950 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 TCHHQ07283 1943 aa16.09■□□□□ 0.17
ATPAF2-208ENST00000496852 PEX10O60683 326 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 TAL1P17542 331 aaPredicted RBP16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 GCLCP48506 637 aaPredicted RBP16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 TRAF1Q13077 416 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 USH1GQ495M9 461 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 RGS22Q8NE09 1264 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 C8orf76Q96K31 380 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 CCPG1Q9ULG6 757 aa16.08■□□□□ 0.17
ATPAF2-208ENST00000496852 ABCB11O95342 1321 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 XBP1P17861 261 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 PDCP20941 246 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 SYT1P21579 422 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 STAT3P40763 770 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 NAPAP54920 295 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 SNRNP48Q6IEG0 339 aaKnown RBP16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 PPP1R18Q6NYC8 613 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 FBXO18Q8NFZ0 1043 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 PAGR1Q9BTK6 254 aa16.08■□□□□ 0.16
ATPAF2-208ENST00000496852 PHF20Q9BVI0 1012 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms