RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ZNF536O15090 1300 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 KBTBD13C9JR72 458 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 PDHBP11177 359 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 CCDC178Q5BJE1 867 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 BTNL9Q6UXG8 535 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 IQCA1Q86XH1 822 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 ANKRD35Q8N283 1001 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 RUFY2Q8WXA3 655 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 PRO3102Q9H379 93 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 HOMER2Q9NSB8 354 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 RNF146Q9NTX7 359 aa18.5■□□□□ 0.55
HDAC4-213ENST00000496347 RARBP10826 455 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 AKR1A1P14550 325 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 SLC4A3P48751 1232 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 DGKHQ86XP1 1220 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 RANBP17Q9H2T7 1088 aaKnown RBP18.49■□□□□ 0.55
HDAC4-213ENST00000496347 CNNM2Q9H8M5 875 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 PNMA2Q9UL42 364 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 MTMR7Q9Y216 660 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 SZT2Q5T011 3432 aa18.49■□□□□ 0.55
HDAC4-213ENST00000496347 A0A1W2PPC1 479 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 ICAM1P05362 532 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 SNHG28P0DPA3 235 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 PRAMEF19Q5SWL8 479 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 SYDE2Q5VT97 1194 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 AGBL1Q96MI9 1066 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 KRT23Q9C075 422 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 IL25Q9H293 177 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 A1CFQ9NQ94 594 aaKnown RBP18.48■□□□□ 0.55
HDAC4-213ENST00000496347 CCPG1Q9ULG6 757 aa18.48■□□□□ 0.55
HDAC4-213ENST00000496347 KDM4AO75164 1064 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 ZNF865P0CJ78 1059 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-213ENST00000496347 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 LRRC26Q2I0M4 334 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 GPATCH4Q5T3I0 446 aaKnown RBP18.47■□□□□ 0.55
HDAC4-213ENST00000496347 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 FGD4Q96M96 766 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 XPNPEP3Q9NQH7 507 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 RBM27Q9P2N5 1060 aaKnown RBP18.47■□□□□ 0.55
HDAC4-213ENST00000496347 MYH6P13533 1939 aa18.47■□□□□ 0.55
HDAC4-213ENST00000496347 FRMPD2Q68DX3 1309 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-213ENST00000496347 LTBP2Q14767 1821 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 B4E1Z4 1266 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 ALAS1P13196 640 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 CHMLP26374 656 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 LRRC41Q15345 812 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 GJC2Q5T442 439 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-213ENST00000496347 ANO1Q5XXA6 986 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 FAM133AQ8N9E0 248 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 TRERF1Q96PN7 1200 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 SENP6Q9GZR1 1112 aaPredicted RBP18.46■□□□□ 0.55
HDAC4-213ENST00000496347 WDR19Q8NEZ3 1342 aa18.46■□□□□ 0.55
HDAC4-213ENST00000496347 POTEB2H3BUK9 544 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 FXR1P51114 621 aaKnown RBP eCLIP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 ARMCX2Q7L311 632 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 RNF180Q86T96 592 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 ANKS1AQ92625 1134 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 ZSCAN10Q96SZ4 725 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 UBAC1Q9BSL1 405 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 ABHD16BQ9H3Z7 469 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 ZHX1Q9UKY1 873 aaPredicted RBP18.45■□□□□ 0.54
HDAC4-213ENST00000496347 TNKSO95271 1327 aa18.45■□□□□ 0.54
HDAC4-213ENST00000496347 SLC16A2P36021 539 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 SNX17Q15036 470 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-213ENST00000496347 PNMA1Q8ND90 353 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 ZKSCAN3Q9BRR0 538 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 KAT14Q9H8E8 782 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 GPCPD1Q9NPB8 672 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 CYP39A1Q9NYL5 469 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 FAM184BQ9ULE4 1060 aa18.44■□□□□ 0.54
HDAC4-213ENST00000496347 ZMYND8Q9ULU4 1186 aaPredicted RBP18.44■□□□□ 0.54
HDAC4-213ENST00000496347 LAMA2P24043 3122 aaKnown RBP18.44■□□□□ 0.54
HDAC4-213ENST00000496347 ASB14A6NK59 587 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 SGSM2O43147 1006 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 SNAP25P60880 206 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 ASPRV1Q53RT3 343 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 GDF15Q99988 308 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 PHF24Q9UPV7 400 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
HDAC4-213ENST00000496347 SYNRGQ9UMZ2 1314 aa18.43■□□□□ 0.54
HDAC4-213ENST00000496347 ADAMTS4O75173 837 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 DUSP11O75319 330 aaKnown RBP18.42■□□□□ 0.54
HDAC4-213ENST00000496347 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-213ENST00000496347 BMP8BP34820 402 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 CNTN2Q02246 1040 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 ACVR2BQ13705 512 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 MUM1L1Q5H9M0 696 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 C1orf53Q5VUE5 145 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-213ENST00000496347 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
HDAC4-213ENST00000496347 ZSWIM5Q9P217 1185 aa18.42■□□□□ 0.54
HDAC4-213ENST00000496347 LOC102724159A0A0B4J2E5 919 aa18.41■□□□□ 0.54
HDAC4-213ENST00000496347 PGK1P00558 417 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms